RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 LMAN2LQ9H0V9 348 aa11.97□□□□□ -0.49
DDX39A-203ENST00000454233 ATP6V0A4Q9HBG4 840 aa11.97□□□□□ -0.49
DDX39A-203ENST00000454233 CYP26B1Q9NR63 512 aa11.97□□□□□ -0.49
DDX39A-203ENST00000454233 PCDHA12Q9UN75 941 aa11.97□□□□□ -0.49
DDX39A-203ENST00000454233 PPME1Q9Y570 386 aa11.97□□□□□ -0.49
DDX39A-203ENST00000454233 MRPL42Q9Y6G3 142 aaKnown RBP11.97□□□□□ -0.49
DDX39A-203ENST00000454233 A0A0C4DFX4 3053 aa11.97□□□□□ -0.49
DDX39A-203ENST00000454233 TRANK1O15050 2925 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 IGKV6-21A0A0C4DH24 114 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 MAFO75444 373 aaPredicted RBP11.96□□□□□ -0.49
DDX39A-203ENST00000454233 RBM25P49756 843 aaKnown RBP11.96□□□□□ -0.49
DDX39A-203ENST00000454233 POLGP54098 1239 aaPredicted RBP11.96□□□□□ -0.49
DDX39A-203ENST00000454233 DRP2Q13474 957 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 GNL2Q13823 731 aaKnown RBP11.96□□□□□ -0.49
DDX39A-203ENST00000454233 DSC3Q14574 896 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 NAALADL2Q58DX5 795 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 SPOUT1Q5T280 376 aaKnown RBP11.96□□□□□ -0.49
DDX39A-203ENST00000454233 RHPN2Q8IUC4 686 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 C4orf19Q8IY42 314 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 ADAMTS19Q8TE59 1207 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 P2RX5Q93086 422 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 DYDC2Q96IM9 177 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 CEP89Q96ST8 783 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 KIF2CQ99661 725 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 LXNQ9BS40 222 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 INO80BQ9C086 356 aaPredicted RBP11.96□□□□□ -0.49
DDX39A-203ENST00000454233 NSUN3Q9H649 340 aaKnown RBP11.96□□□□□ -0.49
DDX39A-203ENST00000454233 ELAC1Q9H777 363 aaKnown RBP11.96□□□□□ -0.49
DDX39A-203ENST00000454233 ZSWIM4Q9H7M6 989 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 TMEM161AQ9NX61 479 aa11.96□□□□□ -0.49
DDX39A-203ENST00000454233 SUCLA2Q9P2R7 463 aaPredicted RBP11.96□□□□□ -0.49
DDX39A-203ENST00000454233 PRUNE2Q8WUY3 3088 aa11.96□□□□□ -0.5
DDX39A-203ENST00000454233 EYSQ5T1H1 3165 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 A0A087WZ62 844 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 TBKBP1A7MCY6 615 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 HOXA2O43364 376 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 ST18O60284 1047 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 LINC00271P0C7V0 271 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 ATP2B1P20020 1258 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 SFPQP23246 707 aaKnown RBP eCLIP11.95□□□□□ -0.5
DDX39A-203ENST00000454233 YWHABP31946 246 aaKnown RBP11.95□□□□□ -0.5
DDX39A-203ENST00000454233 RFC5P40937 340 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 TXKP42681 527 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 GATMP50440 423 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 KCNQ1P51787 676 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 NPEPPSP55786 919 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 FAM189BP81408 668 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 CYP4A11Q02928 519 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 SPIRE1Q08AE8 756 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 CTTNQ14247 550 aaKnown RBP11.95□□□□□ -0.5
DDX39A-203ENST00000454233 RABEP1Q15276 862 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 ZNF410Q86VK4 478 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 TPH2Q8IWU9 490 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 NEK9Q8TD19 979 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 UHRF1Q96T88 793 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-203ENST00000454233 FDXACB1Q9BRP7 624 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-203ENST00000454233 UBE2ZQ9H832 354 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-203ENST00000454233 TTC12Q9H892 705 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-203ENST00000454233 AAASQ9NRG9 546 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 DACT1Q9NYF0 836 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 RGL1Q9NZL6 768 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 UNC80Q8N2C7 3258 aa11.95□□□□□ -0.5
DDX39A-203ENST00000454233 GRM6O15303 877 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 GAS2O43903 313 aaKnown RBP11.94□□□□□ -0.5
DDX39A-203ENST00000454233 BMP1P13497 986 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 FGFR4P22455 802 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 MCM7P33993 719 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 XKR9Q5GH70 373 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 TCEAL5Q5H9L2 206 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 FAM102BQ5T8I3 360 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 ABI1Q8IZP0 508 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 FBXO18Q8NFZ0 1043 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 TCP11Q8WWU5 503 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 PSPC1Q8WXF1 523 aaKnown RBP11.94□□□□□ -0.5
DDX39A-203ENST00000454233 NLRP4Q96MN2 994 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 CCDC43Q96MW1 224 aaKnown RBP11.94□□□□□ -0.5
DDX39A-203ENST00000454233 EIF2AK1Q9BQI3 630 aaKnown RBP11.94□□□□□ -0.5
DDX39A-203ENST00000454233 FOXP1Q9H334 677 aaPredicted RBP11.94□□□□□ -0.5
DDX39A-203ENST00000454233 DHX33Q9H6R0 707 aaKnown RBP11.94□□□□□ -0.5
DDX39A-203ENST00000454233 WRAP73Q9P2S5 460 aaPredicted RBP11.94□□□□□ -0.5
DDX39A-203ENST00000454233 PLAGL2Q9UPG8 496 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 KIF3AQ9Y496 699 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 PCDHB12Q9Y5F1 795 aa11.94□□□□□ -0.5
DDX39A-203ENST00000454233 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-203ENST00000454233 TNFRSF10AO00220 468 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 ASAP2O43150 1006 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 NCK2O43639 380 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 CSDE1O75534 798 aaKnown RBP11.93□□□□□ -0.5
DDX39A-203ENST00000454233 SLITRK3O94933 977 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 FGFR1P11362 822 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 ORC2Q13416 577 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-203ENST00000454233 EMC2Q15006 297 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 EP400NLQ6ZTU2 488 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 CATSPER4Q7RTX7 472 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 ECHDC2Q86YB7 292 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
DDX39A-203ENST00000454233 KLHL23Q8NBE8 558 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 RNF169Q8NCN4 708 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 PPP2R3CQ969Q6 453 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms