RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 GPC3P51654 580 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 ARL6IP4Q66PJ3 421 aaKnown RBP16.35■□□□□ 0.21
VPS16-205ENST00000453689 FAM117BQ6P1L5 589 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 LINC00301Q8NCQ3 95 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 LINC01599Q8WXQ3 324 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 ZNF668Q96K58 619 aaPredicted RBP16.35■□□□□ 0.21
VPS16-205ENST00000453689 GUCD1Q96NT3 240 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 JPH2Q9BR39 696 aaPredicted RBP16.35■□□□□ 0.21
VPS16-205ENST00000453689 ZBED2Q9BTP6 218 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 POLR3CQ9BUI4 534 aaPredicted RBP16.35■□□□□ 0.21
VPS16-205ENST00000453689 ADAMTS10Q9H324 1103 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 SLC28A3Q9HAS3 691 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 ERVK-5Q9HDB9 667 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 TFIP11Q9UBB9 837 aaKnown RBP16.35■□□□□ 0.21
VPS16-205ENST00000453689 ENPP3O14638 875 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 RPS6KA5O75582 802 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 CA3P07451 260 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 NCLP19338 710 aaKnown RBP16.34■□□□□ 0.21
VPS16-205ENST00000453689 RPA1P27694 616 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 RFC5P40937 340 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 DNM2P50570 870 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 POLGP54098 1239 aaPredicted RBP16.34■□□□□ 0.21
VPS16-205ENST00000453689 NFX1Q12986 1120 aaKnown RBP16.34■□□□□ 0.21
VPS16-205ENST00000453689 SLC39A14Q15043 492 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 STK38Q15208 465 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 PPP2R2DQ66LE6 453 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 DTHD1Q6ZMT9 781 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 FAM228AQ86W67 206 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 CATSPER3Q86XQ3 398 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 ZNF710Q8N1W2 664 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 IGSF22Q8N9C0 903 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 ERMNQ8TAM6 284 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 PIGOQ8TEQ8 1089 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 SLC7A3Q8WY07 619 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 TOP1MTQ969P6 601 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 TMX1Q9H3N1 280 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
VPS16-205ENST00000453689 ANKEF1Q9NU02 776 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 SUCLA2Q9P2R7 463 aaPredicted RBP16.34■□□□□ 0.21
VPS16-205ENST00000453689 ATG2AQ2TAZ0 1938 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 CDH23Q9H251 3354 aa16.34■□□□□ 0.21
VPS16-205ENST00000453689 A0A087WWV3 80 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 LCHNA4D1U4 455 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 ARHGEF15O94989 841 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 UPP2O95045 317 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 PDIA5Q14554 519 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 GRIN2CQ14957 1233 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 EMC2Q15006 297 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 IL17AQ16552 155 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 RTN4RL1Q86UN2 441 aaPredicted RBP16.33■□□□□ 0.2
VPS16-205ENST00000453689 EXOC8Q8IYI6 725 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 NLRP7Q8WX94 980 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 RAD9AQ99638 391 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 FTHL17Q9BXU8 183 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 RAB34Q9BZG1 259 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 LRWD1Q9UFC0 647 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 ST3GAL5Q9UNP4 418 aa16.33■□□□□ 0.2
VPS16-205ENST00000453689 GPR182O15218 404 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 SPTLC2O15270 562 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 GAS2O43903 313 aaKnown RBP16.32■□□□□ 0.2
VPS16-205ENST00000453689 MGEA5O60502 916 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 PPP6R2O75170 966 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 XRCC6P12956 609 aaKnown RBP eCLIP16.32■□□□□ 0.2
VPS16-205ENST00000453689 EIF4BP23588 611 aaKnown RBP16.32■□□□□ 0.2
VPS16-205ENST00000453689 MARCKSP29966 332 aaPredicted RBP16.32■□□□□ 0.2
VPS16-205ENST00000453689 RARRES1P49788 294 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 ODR4Q5SWX8 454 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 HAUS3Q68CZ6 603 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 POTEGQ6S5H5 508 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 RHPN2Q8IUC4 686 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 KSR1Q8IVT5 923 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 TMEM143Q96AN5 459 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 CHAMP1Q96JM3 812 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 SCLT1Q96NL6 688 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 CDX2Q99626 313 aaPredicted RBP16.32■□□□□ 0.2
VPS16-205ENST00000453689 TSPYL2Q9H2G4 693 aaPredicted RBP16.32■□□□□ 0.2
VPS16-205ENST00000453689 XPNPEP1Q9NQW7 623 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 CHD9Q3L8U1 2897 aa16.32■□□□□ 0.2
VPS16-205ENST00000453689 TCHHQ07283 1943 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 A0A087WZ62 844 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 VWA3AA6NCI4 1184 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 DARSP14868 501 aaKnown RBP16.31■□□□□ 0.2
VPS16-205ENST00000453689 MUTP22033 750 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 CCT6AP40227 531 aaKnown RBP16.31■□□□□ 0.2
VPS16-205ENST00000453689 HTRA4P83105 476 aaPredicted RBP16.31■□□□□ 0.2
VPS16-205ENST00000453689 CDC42EP1Q00587 391 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 TAP1Q03518 808 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 ECM1Q16610 540 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 TCP11Q8WWU5 503 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 PSPC1Q8WXF1 523 aaKnown RBP16.31■□□□□ 0.2
VPS16-205ENST00000453689 MYLIPQ8WY64 445 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 CCDC43Q96MW1 224 aaKnown RBP16.31■□□□□ 0.2
VPS16-205ENST00000453689 MTRQ99707 1265 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 FDXACB1Q9BRP7 624 aaPredicted RBP16.31■□□□□ 0.2
VPS16-205ENST00000453689 SCAND2PQ9GZW5 306 aaPredicted RBP16.31■□□□□ 0.2
VPS16-205ENST00000453689 FBXO2Q9UK22 296 aaPredicted RBP16.31■□□□□ 0.2
VPS16-205ENST00000453689 RCOR1Q9UKL0 485 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 INSL6Q9Y581 213 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 SRPRBQ9Y5M8 271 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms