RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 PLEKHG4Q58EX7 1191 aa4.55□□□□□ -1.68
VPS8-212ENST00000452666 HABP4Q5JVS0 413 aaKnown RBP4.55□□□□□ -1.68
VPS8-212ENST00000452666 FAM178BQ8IXR5 827 aa4.55□□□□□ -1.68
VPS8-212ENST00000452666 ANKRD13AQ8IZ07 590 aa4.55□□□□□ -1.68
VPS8-212ENST00000452666 ZNF669Q96BR6 464 aaPredicted RBP4.55□□□□□ -1.68
VPS8-212ENST00000452666 WNK4Q96J92 1243 aa4.55□□□□□ -1.68
VPS8-212ENST00000452666 CCDC136Q96JN2 1154 aa4.55□□□□□ -1.68
VPS8-212ENST00000452666 PRDM13Q9H4Q3 707 aa4.55□□□□□ -1.68
VPS8-212ENST00000452666 INCENPQ9NQS7 918 aa4.55□□□□□ -1.68
VPS8-212ENST00000452666 RNF7Q9UBF6 113 aa4.55□□□□□ -1.68
VPS8-212ENST00000452666 GOLGA6L6A8MZA4 724 aa4.54□□□□□ -1.68
VPS8-212ENST00000452666 POU3F3P20264 500 aaPredicted RBP4.54□□□□□ -1.68
VPS8-212ENST00000452666 PTGS1P23219 599 aa4.54□□□□□ -1.68
VPS8-212ENST00000452666 SAFB2Q14151 953 aaKnown RBP eCLIP4.54□□□□□ -1.68
VPS8-212ENST00000452666 TMEM200BQ69YZ2 307 aa4.54□□□□□ -1.68
VPS8-212ENST00000452666 C6orf15Q6UXA7 325 aaPredicted RBP4.54□□□□□ -1.68
VPS8-212ENST00000452666 JMYQ8N9B5 988 aa4.54□□□□□ -1.68
VPS8-212ENST00000452666 ST13P5Q8NFI4 369 aaPredicted RBP4.54□□□□□ -1.68
VPS8-212ENST00000452666 SH3TC2Q8TF17 1288 aa4.54□□□□□ -1.68
VPS8-212ENST00000452666 NAP1L5Q96NT1 182 aaPredicted RBP4.54□□□□□ -1.68
VPS8-212ENST00000452666 KCNJ15Q99712 375 aa4.54□□□□□ -1.68
VPS8-212ENST00000452666 GALNT8Q9NY28 637 aa4.54□□□□□ -1.68
VPS8-212ENST00000452666 TESQ9UGI8 421 aaKnown RBP4.54□□□□□ -1.68
VPS8-212ENST00000452666 FRMD4BQ9Y2L6 1034 aa4.54□□□□□ -1.68
VPS8-212ENST00000452666 INSL6Q9Y581 213 aa4.54□□□□□ -1.68
VPS8-212ENST00000452666 KLRG2A4D1S0 409 aaPredicted RBP4.53□□□□□ -1.68
VPS8-212ENST00000452666 MSCO60682 206 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 C1RP00736 705 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 HOXB6P17509 224 aaKnown RBP4.53□□□□□ -1.68
VPS8-212ENST00000452666 PTMSP20962 102 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 NR4A1P22736 598 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 MTERF2Q49AM1 385 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 BTBD8Q5XKL5 378 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 SP5Q6BEB4 398 aaPredicted RBP4.53□□□□□ -1.68
VPS8-212ENST00000452666 WDR48Q8TAF3 677 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 APPBP2Q92624 585 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 C16orf92Q96LL3 132 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 TMX1Q9H3N1 280 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 KANSL2Q9H9L4 492 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 TMEM260Q9NX78 707 aa4.53□□□□□ -1.68
VPS8-212ENST00000452666 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.52□□□□□ -1.69
VPS8-212ENST00000452666 B2RBV5 119 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 CDC45O75419 566 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 USP14P54578 494 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 CD83Q01151 205 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 KIZQ2M2Z5 673 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 TIGD2Q4W5G0 525 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 RNF187Q5TA31 235 aaPredicted RBP4.52□□□□□ -1.69
VPS8-212ENST00000452666 MRM1Q6IN84 353 aaKnown RBP4.52□□□□□ -1.69
VPS8-212ENST00000452666 RSPO2Q6UXX9 243 aaPredicted RBP4.52□□□□□ -1.69
VPS8-212ENST00000452666 NOL8Q76FK4 1167 aaKnown RBP4.52□□□□□ -1.69
VPS8-212ENST00000452666 EEPD1Q7L9B9 569 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 GRASPQ7Z6J2 395 aaPredicted RBP4.52□□□□□ -1.69
VPS8-212ENST00000452666 HOMER1Q86YM7 354 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 ZNF366Q8N895 744 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 SUPT20HQ8NEM7 779 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 BTBD2Q9BX70 525 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 FANCLQ9NW38 375 aa4.52□□□□□ -1.69
VPS8-212ENST00000452666 PTPN1P18031 435 aaKnown RBP4.51□□□□□ -1.69
VPS8-212ENST00000452666 STAT5BP51692 787 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 RABGGTBP53611 331 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 ELLP55199 621 aaPredicted RBP4.51□□□□□ -1.69
VPS8-212ENST00000452666 SQSTM1Q13501 440 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 PRR16Q569H4 304 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 C2orf27AQ580R0 203 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 TMED8Q6PL24 325 aaPredicted RBP4.51□□□□□ -1.69
VPS8-212ENST00000452666 Q6YL49 198 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 C16orf86Q6ZW13 317 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 HTR3DQ70Z44 454 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 SPATC1Q76KD6 591 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 KIAA0907Q7Z7F0 614 aaPredicted RBP4.51□□□□□ -1.69
VPS8-212ENST00000452666 KCTD13Q8WZ19 329 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 LPPQ93052 612 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 MNTQ99583 582 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 PHF20Q9BVI0 1012 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 SPATA5L1Q9BVQ7 753 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 CD244Q9BZW8 370 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 BRINP2Q9C0B6 783 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 EPN3Q9H201 632 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 RIC8BQ9NVN3 520 aa4.51□□□□□ -1.69
VPS8-212ENST00000452666 KDM2BQ8NHM5 1336 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 DIAPH1O60610 1272 aaKnown RBP4.5□□□□□ -1.69
VPS8-212ENST00000452666 STAT3P40763 770 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 SETQ01105 290 aaPredicted RBP4.5□□□□□ -1.69
VPS8-212ENST00000452666 SSRP1Q08945 709 aaKnown RBP4.5□□□□□ -1.69
VPS8-212ENST00000452666 MAP4K2Q12851 820 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 MOGSQ13724 837 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 PTPROQ16827 1216 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 LONRF2Q1L5Z9 754 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 ERCC6LQ2NKX8 1250 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 FAM111BQ6SJ93 734 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 NLGN4XQ8N0W4 816 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 SYNPOQ8N3V7 929 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 ATXN2LQ8WWM7 1075 aaKnown RBP4.5□□□□□ -1.69
VPS8-212ENST00000452666 PGBD4Q96DM1 585 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 SLKQ9H2G2 1235 aaPredicted RBP4.5□□□□□ -1.69
VPS8-212ENST00000452666 PRKAB1Q9Y478 270 aa4.5□□□□□ -1.69
VPS8-212ENST00000452666 IQCA1LA6NCM1 817 aa4.49□□□□□ -1.69
VPS8-212ENST00000452666 PPP1R12AO14974 1030 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms