RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 NR5A1Q13285 461 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 TRIM29Q14134 588 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 LEXMQ3ZCV2 418 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 PABPC5Q96DU9 382 aaKnown RBP14.47□□□□□ -0.09
CHD3-206ENST00000452447 JPH2Q9BR39 696 aaPredicted RBP14.47□□□□□ -0.09
CHD3-206ENST00000452447 ELAC1Q9H777 363 aaKnown RBP14.47□□□□□ -0.09
CHD3-206ENST00000452447 AAASQ9NRG9 546 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 TMEM161AQ9NX61 479 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 PCDHB12Q9Y5F1 795 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 EML1O00423 815 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 SEC24BO95487 1268 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 MMP1P03956 469 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 ITGB1P05556 798 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 DARSP14868 501 aaKnown RBP14.46□□□□□ -0.09
CHD3-206ENST00000452447 DSC3Q14574 896 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 FAM102BQ5T8I3 360 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 ANO5Q75V66 913 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 SLFN12Q8IYM2 578 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 KLHL23Q8NBE8 558 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 NSUN7Q8NE18 718 aaKnown RBP14.46□□□□□ -0.09
CHD3-206ENST00000452447 PPP2R3CQ969Q6 453 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 GCOM2Q9BZD3 368 aaPredicted RBP14.46□□□□□ -0.09
CHD3-206ENST00000452447 CLDND1Q9NY35 253 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 VAV3Q9UKW4 847 aa14.46□□□□□ -0.09
CHD3-206ENST00000452447 H3BQ06 376 aaPredicted RBP14.45□□□□□ -0.1
CHD3-206ENST00000452447 HOXA2O43364 376 aa14.45□□□□□ -0.1
CHD3-206ENST00000452447 STBD1O95210 358 aa14.45□□□□□ -0.1
CHD3-206ENST00000452447 P4HBP07237 508 aaKnown RBP14.45□□□□□ -0.1
CHD3-206ENST00000452447 FAM189BP81408 668 aa14.45□□□□□ -0.1
CHD3-206ENST00000452447 DRP2Q13474 957 aa14.45□□□□□ -0.1
CHD3-206ENST00000452447 PUS10Q3MIT2 529 aaKnown RBP14.45□□□□□ -0.1
CHD3-206ENST00000452447 EARS2Q5JPH6 523 aaKnown RBP14.45□□□□□ -0.1
CHD3-206ENST00000452447 PTCRAQ6ISU1 281 aaPredicted RBP14.45□□□□□ -0.1
CHD3-206ENST00000452447 POTEDQ86YR6 584 aa14.45□□□□□ -0.1
CHD3-206ENST00000452447 ABI1Q8IZP0 508 aa14.45□□□□□ -0.1
CHD3-206ENST00000452447 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.45□□□□□ -0.1
CHD3-206ENST00000452447 POF1BQ8WVV4 589 aa14.45□□□□□ -0.1
CHD3-206ENST00000452447 HAS1Q92839 578 aa14.45□□□□□ -0.1
CHD3-206ENST00000452447 C5orf42Q9H799 3197 aa14.45□□□□□ -0.1
CHD3-206ENST00000452447 DACT1Q9NYF0 836 aa14.45□□□□□ -0.1
CHD3-206ENST00000452447 SUCLA2Q9P2R7 463 aaPredicted RBP14.45□□□□□ -0.1
CHD3-206ENST00000452447 JAK2O60674 1132 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 MAFO75444 373 aaPredicted RBP14.44□□□□□ -0.1
CHD3-206ENST00000452447 FGFR1P11362 822 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 FOSBP53539 338 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 EPHA7Q15375 998 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 PLA2G4FQ68DD2 849 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 NCAPH2Q6IBW4 605 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 RHPN2Q8IUC4 686 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 EXOC8Q8IYI6 725 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 RNF169Q8NCN4 708 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 SPPL3Q8TCT6 385 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 NEK9Q8TD19 979 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 SLC7A3Q8WY07 619 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 INO80BQ9C086 356 aaPredicted RBP14.44□□□□□ -0.1
CHD3-206ENST00000452447 CYP26B1Q9NR63 512 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 TYW1Q9NV66 732 aaKnown RBP14.44□□□□□ -0.1
CHD3-206ENST00000452447 FAM50BQ9Y247 325 aa14.44□□□□□ -0.1
CHD3-206ENST00000452447 A0A087WZ62 844 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 IGKV6-21A0A0C4DH24 114 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 FAM205CA6NFA0 338 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 BTBD18B2RXH4 712 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 CSDE1O75534 798 aaKnown RBP14.43□□□□□ -0.1
CHD3-206ENST00000452447 FGFR4P22455 802 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 SFPQP23246 707 aaKnown RBP eCLIP14.43□□□□□ -0.1
CHD3-206ENST00000452447 CAMK1Q14012 370 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 CSPP1Q1MSJ5 1256 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 OTUD6AQ7L8S5 288 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 ZNF410Q86VK4 478 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 DIS3L2Q8IYB7 885 aaKnown RBP14.43□□□□□ -0.1
CHD3-206ENST00000452447 CEP170P1Q96L14 293 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 CEP89Q96ST8 783 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 FDXACB1Q9BRP7 624 aaPredicted RBP14.43□□□□□ -0.1
CHD3-206ENST00000452447 LXNQ9BS40 222 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 TMEM117Q9H0C3 514 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 IGFLR1Q9H665 355 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 LIMCH1Q9UPQ0 1083 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 PPME1Q9Y570 386 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 PLXNA4Q9HCM2 1894 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 DNAJB1P25685 340 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 YWHABP31946 246 aaKnown RBP14.43□□□□□ -0.1
CHD3-206ENST00000452447 POLGP54098 1239 aaPredicted RBP14.43□□□□□ -0.1
CHD3-206ENST00000452447 NPEPPSP55786 919 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 HYAL1Q12794 435 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 COL19A1Q14993 1142 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 SAFBQ15424 915 aaKnown RBP eCLIP14.43□□□□□ -0.1
CHD3-206ENST00000452447 CALCRLQ16602 461 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 ECHDC2Q86YB7 292 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 C4orf19Q8IY42 314 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 THNSL1Q8IYQ7 743 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 MICAL1Q8TDZ2 1067 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 TNFRSF25Q93038 417 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 NLRP4Q96MN2 994 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 ZSWIM4Q9H7M6 989 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 CHST12Q9NRB3 414 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 RGL1Q9NZL6 768 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 PCDHA12Q9UN75 941 aa14.43□□□□□ -0.1
CHD3-206ENST00000452447 A0A0U1RQF3 1178 aa14.42□□□□□ -0.1
CHD3-206ENST00000452447 GRXCR2A6NFK2 248 aa14.42□□□□□ -0.1
CHD3-206ENST00000452447 EOMESO95936 686 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms