RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 SUCLA2Q9P2R7 463 aaPredicted RBP20.09■□□□□ 0.81
CTNS-204ENST00000452111 TTC3P53804 2025 aa20.09■□□□□ 0.81
CTNS-204ENST00000452111 H3BNC9 293 aa20.08■□□□□ 0.81
CTNS-204ENST00000452111 CSDE1O75534 798 aaKnown RBP20.08■□□□□ 0.81
CTNS-204ENST00000452111 DARSP14868 501 aaKnown RBP20.08■□□□□ 0.81
CTNS-204ENST00000452111 FGFR4P22455 802 aa20.08■□□□□ 0.81
CTNS-204ENST00000452111 YWHABP31946 246 aaKnown RBP20.08■□□□□ 0.81
CTNS-204ENST00000452111 RHPN2Q8IUC4 686 aa20.08■□□□□ 0.81
CTNS-204ENST00000452111 TPH2Q8IWU9 490 aa20.08■□□□□ 0.81
CTNS-204ENST00000452111 C4orf19Q8IY42 314 aa20.08■□□□□ 0.81
CTNS-204ENST00000452111 CMTR2Q8IYT2 770 aaKnown RBP20.08■□□□□ 0.81
CTNS-204ENST00000452111 SLC7A3Q8WY07 619 aa20.08■□□□□ 0.81
CTNS-204ENST00000452111 MTMR9Q96QG7 549 aa20.08■□□□□ 0.81
CTNS-204ENST00000452111 EIF2AK1Q9BQI3 630 aaKnown RBP20.08■□□□□ 0.81
CTNS-204ENST00000452111 TMEM60Q9H2L4 133 aa20.08■□□□□ 0.81
CTNS-204ENST00000452111 FOXP1Q9H334 677 aaPredicted RBP20.08■□□□□ 0.81
CTNS-204ENST00000452111 ZSWIM4Q9H7M6 989 aa20.08■□□□□ 0.81
CTNS-204ENST00000452111 RWDD3Q9Y3V2 267 aa20.08■□□□□ 0.81
CTNS-204ENST00000452111 MRPL42Q9Y6G3 142 aaKnown RBP20.08■□□□□ 0.81
CTNS-204ENST00000452111 REV3LO60673 3130 aa20.07■□□□□ 0.8
CTNS-204ENST00000452111 C9IYK1 514 aa20.07■□□□□ 0.8
CTNS-204ENST00000452111 BMPR1AP36894 532 aa20.07■□□□□ 0.8
CTNS-204ENST00000452111 POLGP54098 1239 aaPredicted RBP20.07■□□□□ 0.8
CTNS-204ENST00000452111 MRPS5P82675 430 aaKnown RBP20.07■□□□□ 0.8
CTNS-204ENST00000452111 TFF2Q03403 129 aa20.07■□□□□ 0.8
CTNS-204ENST00000452111 DSC3Q14574 896 aa20.07■□□□□ 0.8
CTNS-204ENST00000452111 PTPROQ16827 1216 aa20.07■□□□□ 0.8
CTNS-204ENST00000452111 FAM43BQ6ZT52 329 aaPredicted RBP20.07■□□□□ 0.8
CTNS-204ENST00000452111 CLP1Q92989 425 aaKnown RBP20.07■□□□□ 0.8
CTNS-204ENST00000452111 NLRP4Q96MN2 994 aa20.07■□□□□ 0.8
CTNS-204ENST00000452111 ASB2Q96Q27 587 aa20.07■□□□□ 0.8
CTNS-204ENST00000452111 JPH2Q9BR39 696 aaPredicted RBP20.07■□□□□ 0.8
CTNS-204ENST00000452111 GCOM2Q9BZD3 368 aaPredicted RBP20.07■□□□□ 0.8
CTNS-204ENST00000452111 CUL9Q8IWT3 2517 aa20.07■□□□□ 0.8
CTNS-204ENST00000452111 WDR81Q562E7 1941 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 LOXHD1Q8IVV2 1947 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 A0A087WZ62 844 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 POTEMA6NI47 508 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 C5orf67F2Z3F1 127 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 ZBTB39O15060 712 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 SLITRK3O94933 977 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 CD2BP2O95400 341 aaKnown RBP20.06■□□□□ 0.8
CTNS-204ENST00000452111 ZSCAN20P17040 1043 aaPredicted RBP20.06■□□□□ 0.8
CTNS-204ENST00000452111 ZNF174Q15697 407 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 XKR9Q5GH70 373 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 OTUD6AQ7L8S5 288 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 NOSTRINQ8IVI9 506 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 KSR1Q8IVT5 923 aa20.06■□□□□ 0.8
CTNS-204ENST00000452111 MRPL38Q96DV4 380 aaKnown RBP20.06■□□□□ 0.8
CTNS-204ENST00000452111 FDXACB1Q9BRP7 624 aaPredicted RBP20.06■□□□□ 0.8
CTNS-204ENST00000452111 C11orf84Q9BUA3 381 aaPredicted RBP20.06■□□□□ 0.8
CTNS-204ENST00000452111 TBKBP1A7MCY6 615 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 CSPG5O95196 566 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 RB1P06400 928 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 FGFR1P11362 822 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 RFC5P40937 340 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 CDC42EP1Q00587 391 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 FAM102BQ5T8I3 360 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 ZNF410Q86VK4 478 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 TMEM143Q96AN5 459 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 TMX3Q96JJ7 454 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 TBC1D32Q96NH3 1257 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 DHX33Q9H6R0 707 aaKnown RBP20.05■□□□□ 0.8
CTNS-204ENST00000452111 ATP6V0A4Q9HBG4 840 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 RNF216Q9NWF9 866 aaPredicted RBP20.05■□□□□ 0.8
CTNS-204ENST00000452111 PPME1Q9Y570 386 aa20.05■□□□□ 0.8
CTNS-204ENST00000452111 GRM6O15303 877 aa20.04■□□□□ 0.8
CTNS-204ENST00000452111 EMC2Q15006 297 aa20.04■□□□□ 0.8
CTNS-204ENST00000452111 TTC38Q5R3I4 469 aa20.04■□□□□ 0.8
CTNS-204ENST00000452111 IL27Q8NEV9 243 aa20.04■□□□□ 0.8
CTNS-204ENST00000452111 NEK9Q8TD19 979 aa20.04■□□□□ 0.8
CTNS-204ENST00000452111 SYMPKQ92797 1274 aaKnown RBP20.04■□□□□ 0.8
CTNS-204ENST00000452111 HSD17B14Q9BPX1 270 aa20.04■□□□□ 0.8
CTNS-204ENST00000452111 TMEM161AQ9NX61 479 aa20.04■□□□□ 0.8
CTNS-204ENST00000452111 COL4A3BPQ9Y5P4 624 aa20.04■□□□□ 0.8
CTNS-204ENST00000452111 OR52Z1P0C646 297 aa20.03■□□□□ 0.8
CTNS-204ENST00000452111 SFPQP23246 707 aaKnown RBP eCLIP20.03■□□□□ 0.8
CTNS-204ENST00000452111 FAM189BP81408 668 aa20.03■□□□□ 0.8
CTNS-204ENST00000452111 NBR1Q14596 966 aa20.03■□□□□ 0.8
CTNS-204ENST00000452111 TIGD5Q53EQ6 642 aa20.03■□□□□ 0.8
CTNS-204ENST00000452111 EXOC8Q8IYI6 725 aa20.03■□□□□ 0.8
CTNS-204ENST00000452111 RNF169Q8NCN4 708 aa20.03■□□□□ 0.8
CTNS-204ENST00000452111 PSPC1Q8WXF1 523 aaKnown RBP20.03■□□□□ 0.8
CTNS-204ENST00000452111 HLA-CQ95604 372 aa20.03■□□□□ 0.8
CTNS-204ENST00000452111 CCDC43Q96MW1 224 aaKnown RBP20.03■□□□□ 0.8
CTNS-204ENST00000452111 PLVAPQ9BX97 442 aa20.03■□□□□ 0.8
CTNS-204ENST00000452111 ELAC1Q9H777 363 aaKnown RBP20.03■□□□□ 0.8
CTNS-204ENST00000452111 NOL7Q9UMY1 257 aaKnown RBP20.03■□□□□ 0.8
CTNS-204ENST00000452111 COG5Q9UP83 839 aa20.03■□□□□ 0.8
CTNS-204ENST00000452111 LYPLA2O95372 231 aa20.02■□□□□ 0.8
CTNS-204ENST00000452111 TECP42680 631 aa20.02■□□□□ 0.8
CTNS-204ENST00000452111 KCNQ1P51787 676 aa20.02■□□□□ 0.8
CTNS-204ENST00000452111 SPOUT1Q5T280 376 aaKnown RBP20.02■□□□□ 0.8
CTNS-204ENST00000452111 PRPF31Q8WWY3 499 aaKnown RBP20.02■□□□□ 0.8
CTNS-204ENST00000452111 MTRQ99707 1265 aa20.02■□□□□ 0.8
CTNS-204ENST00000452111 INO80BQ9C086 356 aaPredicted RBP20.02■□□□□ 0.8
CTNS-204ENST00000452111 ALG13Q9NP73 1137 aaKnown RBP20.02■□□□□ 0.8
CTNS-204ENST00000452111 HCSTQ9UBK5 93 aa20.02■□□□□ 0.8
CTNS-204ENST00000452111 KIF3AQ9Y496 699 aa20.02■□□□□ 0.8
CTNS-204ENST00000452111 A0A087WWV3 80 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms