RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SH2D3AQ9BRG2 576 aa14.02□□□□□ -0.17
CPSF4-208ENST00000452047 LRFN2Q9ULH4 789 aa14.02□□□□□ -0.17
CPSF4-208ENST00000452047 PCDHB7Q9Y5E2 793 aa14.02□□□□□ -0.17
CPSF4-208ENST00000452047 DARSP14868 501 aaKnown RBP14.01□□□□□ -0.17
CPSF4-208ENST00000452047 KCNA5P22460 613 aa14.01□□□□□ -0.17
CPSF4-208ENST00000452047 LEXMQ3ZCV2 418 aa14.01□□□□□ -0.17
CPSF4-208ENST00000452047 FAM102BQ5T8I3 360 aa14.01□□□□□ -0.17
CPSF4-208ENST00000452047 ELAC1Q9H777 363 aaKnown RBP14.01□□□□□ -0.17
CPSF4-208ENST00000452047 TMEM161AQ9NX61 479 aa14.01□□□□□ -0.17
CPSF4-208ENST00000452047 WRAP73Q9P2S5 460 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-208ENST00000452047 PLAGL2Q9UPG8 496 aa14.01□□□□□ -0.17
CPSF4-208ENST00000452047 DDX11L8A8MPP1 907 aa14□□□□□ -0.17
CPSF4-208ENST00000452047 MAFO75444 373 aaPredicted RBP14□□□□□ -0.17
CPSF4-208ENST00000452047 ITGB1P05556 798 aa14□□□□□ -0.17
CPSF4-208ENST00000452047 P4HBP07237 508 aaKnown RBP14□□□□□ -0.17
CPSF4-208ENST00000452047 IBSPP21815 317 aaPredicted RBP14□□□□□ -0.17
CPSF4-208ENST00000452047 DNAJB1P25685 340 aa14□□□□□ -0.17
CPSF4-208ENST00000452047 QARSP47897 775 aaKnown RBP14□□□□□ -0.17
CPSF4-208ENST00000452047 C8orf34Q49A92 452 aa14□□□□□ -0.17
CPSF4-208ENST00000452047 NAALADL2Q58DX5 795 aa14□□□□□ -0.17
CPSF4-208ENST00000452047 PLA2G4FQ68DD2 849 aa14□□□□□ -0.17
CPSF4-208ENST00000452047 NEK9Q8TD19 979 aa14□□□□□ -0.17
CPSF4-208ENST00000452047 PABPC5Q96DU9 382 aaKnown RBP14□□□□□ -0.17
CPSF4-208ENST00000452047 BRMS1Q9HCU9 246 aa14□□□□□ -0.17
CPSF4-208ENST00000452047 ALG13Q9NP73 1137 aaKnown RBP14□□□□□ -0.17
CPSF4-208ENST00000452047 RNF19AQ9NV58 838 aa14□□□□□ -0.17
CPSF4-208ENST00000452047 RNF216Q9NWF9 866 aaPredicted RBP14□□□□□ -0.17
CPSF4-208ENST00000452047 TBKBP1A7MCY6 615 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 BTBD18B2RXH4 712 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 WNT7AO00755 349 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 FGFR1P11362 822 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 FGFR4P22455 802 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 CDC42EP1Q00587 391 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 EPHA7Q15375 998 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 CTC1Q2NKJ3 1217 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 DIS3L2Q8IYB7 885 aaKnown RBP13.99□□□□□ -0.17
CPSF4-208ENST00000452047 SLFN12Q8IYM2 578 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 ZNF579Q8NAF0 562 aaKnown RBP13.99□□□□□ -0.17
CPSF4-208ENST00000452047 KLHL23Q8NBE8 558 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.99□□□□□ -0.17
CPSF4-208ENST00000452047 SPPL3Q8TCT6 385 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 NLRP7Q8WX94 980 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 KIF2CQ99661 725 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 LXNQ9BS40 222 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 ATP6V0A4Q9HBG4 840 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 CYP26B1Q9NR63 512 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 HCSTQ9UBK5 93 aa13.99□□□□□ -0.17
CPSF4-208ENST00000452047 TRIOO75962 3097 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 DKC1O60832 514 aaKnown RBP eCLIP13.98□□□□□ -0.17
CPSF4-208ENST00000452047 CSDE1O75534 798 aaKnown RBP13.98□□□□□ -0.17
CPSF4-208ENST00000452047 DNM2P50570 870 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 FOSBP53539 338 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 NPEPPSP55786 919 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 HYAL1Q12794 435 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 ZNF410Q86VK4 478 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 ECHDC2Q86YB7 292 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 C4orf19Q8IY42 314 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 SCLT1Q96NL6 688 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 GCOM2Q9BZD3 368 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-208ENST00000452047 DHX33Q9H6R0 707 aaKnown RBP13.98□□□□□ -0.17
CPSF4-208ENST00000452047 CWH43Q9H720 699 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 RGL1Q9NZL6 768 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 SUCLA2Q9P2R7 463 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-208ENST00000452047 LIMCH1Q9UPQ0 1083 aa13.98□□□□□ -0.17
CPSF4-208ENST00000452047 A0A087WZ62 844 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 A0A0U1RQF3 1178 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 H3BQ06 376 aaPredicted RBP13.97□□□□□ -0.17
CPSF4-208ENST00000452047 CSPG5O95196 566 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 ZSCAN20P17040 1043 aaPredicted RBP13.97□□□□□ -0.17
CPSF4-208ENST00000452047 ATF7P17544 494 aaPredicted RBP13.97□□□□□ -0.17
CPSF4-208ENST00000452047 GTF2F1P35269 517 aaKnown RBP eCLIP13.97□□□□□ -0.17
CPSF4-208ENST00000452047 IRS1P35568 1242 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 LTBRP36941 435 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 TRIM29Q14134 588 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 NCAPH2Q6IBW4 605 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 ZNF598Q86UK7 904 aaKnown RBP13.97□□□□□ -0.17
CPSF4-208ENST00000452047 RHPN2Q8IUC4 686 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 KSR1Q8IVT5 923 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 POF1BQ8WVV4 589 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 DYDC2Q96IM9 177 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 CASD1Q96PB1 797 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 JPH2Q9BR39 696 aaPredicted RBP13.97□□□□□ -0.17
CPSF4-208ENST00000452047 FDXACB1Q9BRP7 624 aaPredicted RBP13.97□□□□□ -0.17
CPSF4-208ENST00000452047 TMEM117Q9H0C3 514 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 TYW1Q9NV66 732 aaKnown RBP13.97□□□□□ -0.17
CPSF4-208ENST00000452047 CLDND1Q9NY35 253 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 PPME1Q9Y570 386 aa13.97□□□□□ -0.17
CPSF4-208ENST00000452047 GRXCR2A6NFK2 248 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 HOXA2O43364 376 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 NCK2O43639 380 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 MARCH6O60337 910 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 NEMFO60524 1076 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
CPSF4-208ENST00000452047 IL9P15248 144 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 YWHABP31946 246 aaKnown RBP13.96□□□□□ -0.17
CPSF4-208ENST00000452047 CYP4A11Q02928 519 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 DLX2Q07687 328 aaPredicted RBP13.96□□□□□ -0.17
CPSF4-208ENST00000452047 CALCRLQ16602 461 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 CLLU1OSQ5K130 101 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 PTCRAQ6ISU1 281 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms