RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TNRC18O15417 2968 aaPredicted RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 A0A087WZ62 844 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 PP2D1A8MPX8 630 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 EYA4O95677 639 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 SRGAP2CP0DJJ0 459 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 DARSP14868 501 aaKnown RBP9.87□□□□□ -0.83
COL8A1-203ENST00000452013 ZSCAN20P17040 1043 aaPredicted RBP9.87□□□□□ -0.83
COL8A1-203ENST00000452013 CYP11B2P19099 503 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 MARCKSP29966 332 aaPredicted RBP9.87□□□□□ -0.83
COL8A1-203ENST00000452013 ARL2P36404 184 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 FXR1P51114 621 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL8A1-203ENST00000452013 POU5F1BQ06416 359 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 NCBP1Q09161 790 aaKnown RBP9.87□□□□□ -0.83
COL8A1-203ENST00000452013 LAMTOR4Q0VGL1 99 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 DRP2Q13474 957 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 ECM1Q16610 540 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 HYIQ5T013 277 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 FAM109BQ6ICB4 259 aaPredicted RBP9.87□□□□□ -0.83
COL8A1-203ENST00000452013 POTEGQ6S5H5 508 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 PADI6Q6TGC4 694 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL8A1-203ENST00000452013 SRGAP1Q7Z6B7 1085 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 HERC6Q8IVU3 1022 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 RASSF8Q8NHQ8 419 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 PPP1R16BQ96T49 567 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 FDXACB1Q9BRP7 624 aaPredicted RBP9.87□□□□□ -0.83
COL8A1-203ENST00000452013 OSBPL7Q9BZF2 842 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 ERVK-5Q9HDB9 667 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 CCDC39Q9UFE4 941 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 KCNG1Q9UIX4 513 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 PCDHA11Q9Y5I1 949 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 ATP6V1DQ9Y5K8 247 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 COL4A3BPQ9Y5P4 624 aa9.87□□□□□ -0.83
COL8A1-203ENST00000452013 TMEM265A0A087WTH1 108 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 DENND3A2RUS2 1198 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 GRXCR1A8MXD5 290 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 E9PMD0 336 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 SOX1O00570 391 aaPredicted RBP9.86□□□□□ -0.83
COL8A1-203ENST00000452013 SPTLC2O15270 562 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 TLL1O43897 1013 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 USO1O60763 962 aaKnown RBP9.86□□□□□ -0.83
COL8A1-203ENST00000452013 PPP6R2O75170 966 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 YEATS4O95619 227 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 BRD1O95696 1058 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 STAG3L1P0CL83 205 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 PTMSP20962 102 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 SFPQP23246 707 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL8A1-203ENST00000452013 TXLNAP40222 546 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 NASPP49321 788 aaPredicted RBP9.86□□□□□ -0.83
COL8A1-203ENST00000452013 NUCB2P80303 420 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 PCBP1Q15365 356 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL8A1-203ENST00000452013 TCTN1Q2MV58 587 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 FAM102BQ5T8I3 360 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 MAEAQ7L5Y9 396 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 MYOCDQ8IZQ8 938 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 KRI1Q8N9T8 703 aaKnown RBP9.86□□□□□ -0.83
COL8A1-203ENST00000452013 LINC00301Q8NCQ3 95 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 TOP1MTQ969P6 601 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 TIFAQ96CG3 184 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 LRCH3Q96II8 777 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 ZNF668Q96K58 619 aaPredicted RBP9.86□□□□□ -0.83
COL8A1-203ENST00000452013 NLRP4Q96MN2 994 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 RAD9AQ99638 391 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 MMTAG2Q9BU76 263 aaKnown RBP9.86□□□□□ -0.83
COL8A1-203ENST00000452013 PBX4Q9BYU1 374 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 CCSER1Q9C0I3 900 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 CSRNP2Q9H175 543 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 BHMT2Q9H2M3 363 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 SLC28A3Q9HAS3 691 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 CHST12Q9NRB3 414 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 C1orf112Q9NSG2 853 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 BMP2KQ9NSY1 1161 aaPredicted RBP9.86□□□□□ -0.83
COL8A1-203ENST00000452013 FBXO2Q9UK22 296 aaPredicted RBP9.86□□□□□ -0.83
COL8A1-203ENST00000452013 INSL6Q9Y581 213 aa9.86□□□□□ -0.83
COL8A1-203ENST00000452013 MKI67P46013 3256 aaKnown RBP9.86□□□□□ -0.83
COL8A1-203ENST00000452013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-203ENST00000452013 UPP2O95045 317 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 GJB5O95377 273 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 DDIT3P35638 169 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 PHKA2P46019 1235 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 DEFB103AP81534 67 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 GRB10Q13322 594 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 PPP2R5AQ15172 486 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 FOXD4L6Q3SYB3 417 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-203ENST00000452013 ZNF697Q5TEC3 545 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 FOXD4L3Q6VB84 417 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-203ENST00000452013 SLC24A5Q71RS6 500 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 RTN4RL1Q86UN2 441 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-203ENST00000452013 FAM228AQ86W67 206 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 KSR1Q8IVT5 923 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 SYT2Q8N9I0 419 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-203ENST00000452013 RNF149Q8NC42 400 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 KCNG4Q8TDN1 519 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 TMEM40Q8WWA1 233 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 KIFAP3Q92845 792 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 IFT74Q96LB3 600 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 PNMA5Q96PV4 448 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 PLIN2Q99541 437 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 ADAM2Q99965 735 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 TIPINQ9BVW5 301 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms