RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 TMEM117Q9H0C3 514 aa10.95□□□□□ -0.66
SPTLC3-204ENST00000450297 NGRNQ9NPE2 291 aaKnown RBP10.95□□□□□ -0.66
SPTLC3-204ENST00000450297 BARHL2Q9NY43 387 aa10.95□□□□□ -0.66
SPTLC3-204ENST00000450297 CEP131Q9UPN4 1083 aa10.95□□□□□ -0.66
SPTLC3-204ENST00000450297 STK24Q9Y6E0 443 aa10.95□□□□□ -0.66
SPTLC3-204ENST00000450297 KLF18A0A0U1RQI7 1052 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 HIDE1A8MVS5 230 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 FAM86B1E9PN63 330 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 hCG_1984214I3L0E3 225 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 FSCN2O14926 492 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 GFRA3O60609 400 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 C22orf31O95567 290 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 FAM86B2P0C5J1 330 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 TMOD1P28289 359 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 AVPR2P30518 371 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 PPM1AP35813 382 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 CLCN3P51790 818 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 NLRP11P59045 1033 aaKnown RBP10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 TCF15Q12870 199 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 BMS1Q14692 1282 aaKnown RBP10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 NECTIN1Q15223 517 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 TPRNQ4KMQ1 711 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 PRR16Q569H4 304 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 EFCAB12Q6NXP0 572 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 KCNT2Q6UVM3 1135 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 TEX2Q8IWB9 1127 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 LRRC43Q8N309 656 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 ZNF713Q8N859 430 aaPredicted RBP10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 SUSD6Q92537 303 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 IRF2BPLQ9H1B7 796 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 CWH43Q9H720 699 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 ELAC1Q9H777 363 aaKnown RBP10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 TBC1D22BQ9NU19 505 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 SPG21Q9NZD8 308 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 GABBR1Q9UBS5 961 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 BRPF3Q9ULD4 1205 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 LZTS1Q9Y250 596 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 NR2E1Q9Y466 385 aa10.94□□□□□ -0.66
SPTLC3-204ENST00000450297 TTC3P53804 2025 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 ZBTB42B2RXF5 422 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 STK25O00506 426 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 MAGEB2O15479 319 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 GPR32O75388 356 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 HOXB8P17481 243 aaPredicted RBP10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 ATP4AP20648 1035 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 FAM189BP81408 668 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 PLCB3Q01970 1234 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 SMC1AQ14683 1233 aaKnown RBP10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 ZNF746Q6NUN9 644 aaPredicted RBP10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 SYCE2Q6PIF2 218 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 DHX32Q7L7V1 743 aaKnown RBP10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 LRRC71Q8N4P6 559 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 KREMEN2Q8NCW0 462 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 NLRP7Q8WX94 980 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 CASP10Q92851 521 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 FAM167AQ96KS9 214 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 CASD1Q96PB1 797 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 S1PR5Q9H228 398 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 C6orf50Q9HD87 102 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 NRBP2Q9NSY0 501 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 PCDHA10Q9Y5I2 948 aa10.93□□□□□ -0.66
SPTLC3-204ENST00000450297 H0Y858 1186 aa10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 DHX15O43143 795 aaKnown RBP10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 CXCL14O95715 111 aa10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 WEE2P0C1S8 567 aa10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 EIF4BP23588 611 aaKnown RBP10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 ALDH7A1P49419 539 aaKnown RBP10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 METAP2P50579 478 aaKnown RBP eCLIP10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 SETQ01105 290 aaPredicted RBP10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 AKAP17AQ02040 695 aaKnown RBP10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 MTMR3Q13615 1198 aa10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 DSC3Q14574 896 aa10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 TMEM184AQ6ZMB5 413 aa10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 LRRC55Q6ZSA7 311 aa10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 ECHDC2Q86YB7 292 aa10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 SMAP1Q8IYB5 467 aaPredicted RBP10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 REXO1Q8N1G1 1221 aaKnown RBP10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 HELQQ8TDG4 1101 aa10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 CCDC12Q8WUD4 166 aaPredicted RBP10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 ASIC4Q96FT7 647 aa10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 MAFBQ9Y5Q3 323 aaPredicted RBP10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 KAT6AQ92794 2004 aa10.92□□□□□ -0.66
SPTLC3-204ENST00000450297 IGLV3-22A0A075B6J6 115 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 CCDC196A0A1B0GTZ2 297 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 WDR64B1ANS9 1081 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 NT5C1B-RDH14C9J2C7 533 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 CHMP2AO43633 222 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 PDGFBP01127 241 aaPredicted RBP10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 CYP3A4P08684 503 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 FGFR4P22455 802 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 CLK2P49760 499 aaKnown RBP10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 FUT2Q10981 343 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 PFKFB3Q16875 520 aaPredicted RBP10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 RARS2Q5T160 578 aaKnown RBP10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 MCTP2Q6DN12 878 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 MRPL43Q8N983 215 aaKnown RBP10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 TMEM169Q96HH4 297 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 RIPOR3Q96MK2 946 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 NECTIN4Q96NY8 510 aa10.91□□□□□ -0.66
SPTLC3-204ENST00000450297 ADAM7Q9H2U9 754 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms