RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 A0A1B0GVL5 298 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 DCDC2CA8MYV0 355 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 GADD45BO75293 160 aaPredicted RBP10.94□□□□□ -0.66
CCDC171-203ENST00000449575 CYP2C18P33260 490 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 PTPN11Q06124 597 aaPredicted RBP10.94□□□□□ -0.66
CCDC171-203ENST00000449575 DHX8Q14562 1220 aaKnown RBP10.94□□□□□ -0.66
CCDC171-203ENST00000449575 TRIM71Q2Q1W2 868 aaKnown RBP10.94□□□□□ -0.66
CCDC171-203ENST00000449575 ZNF484Q5JVG2 852 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 MAEAQ7L5Y9 396 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 METTL13Q8N6R0 699 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 SCAND2PQ9GZW5 306 aaPredicted RBP10.94□□□□□ -0.66
CCDC171-203ENST00000449575 SUGCTQ9HAC7 445 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 XPNPEP1Q9NQW7 623 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 TMEM39AQ9NV64 488 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 CTSHP09668 335 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 EFCAB12Q6NXP0 572 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 NACC1Q96RE7 527 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 HTATIP2Q9BUP3 242 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 WNT8AQ9H1J5 351 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 GOLPH3LQ9H4A5 285 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 GPRC5CQ9NQ84 441 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 MROH7Q68CQ1 1323 aa10.94□□□□□ -0.66
CCDC171-203ENST00000449575 RRN3P2A6NIE6 340 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 SMTNL1A8MU46 457 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 USO1O60763 962 aaKnown RBP10.93□□□□□ -0.66
CCDC171-203ENST00000449575 VTNP04004 478 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 SLFN14P0C7P3 912 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 CCL23P55773 120 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 RAD51AP2Q09MP3 1159 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 TBC1D8BQ0IIM8 1120 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 RESP18Q5W5W9 173 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 ADALQ6DHV7 355 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 TRAF7Q6Q0C0 670 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 KSR1Q8IVT5 923 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 KIAA0319LQ8IZA0 1049 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 LINC01465Q8N7H1 131 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 STAMQ92783 540 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 TMEM143Q96AN5 459 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 SCLYQ96I15 445 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 NOC4LQ9BVI4 516 aaKnown RBP10.93□□□□□ -0.66
CCDC171-203ENST00000449575 RUSC1Q9BVN2 902 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 CDHR5Q9HBB8 845 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 COL1A2P08123 1366 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 NPHP3-ACAD11A0A0J9YXS1 232 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 MCM6Q14566 821 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 GPNMBQ14956 572 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 ZNF618Q5T7W0 954 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 RASSF8Q8NHQ8 419 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 CDK5RAP3Q96JB5 506 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 HIPK3Q9H422 1215 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 DHX33Q9H6R0 707 aaKnown RBP10.93□□□□□ -0.66
CCDC171-203ENST00000449575 ANKEF1Q9NU02 776 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 PAXBP1Q9Y5B6 917 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 PCDHA2Q9Y5H9 948 aa10.93□□□□□ -0.66
CCDC171-203ENST00000449575 IGKV6-21A0A0C4DH24 114 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 DKC1O60832 514 aaKnown RBP eCLIP10.92□□□□□ -0.66
CCDC171-203ENST00000449575 MAFO75444 373 aaPredicted RBP10.92□□□□□ -0.66
CCDC171-203ENST00000449575 SSBP05455 408 aaKnown RBP eCLIP10.92□□□□□ -0.66
CCDC171-203ENST00000449575 GNAT1P11488 350 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 CKBP12277 381 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 THPOP40225 353 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 CACNB1Q02641 598 aaPredicted RBP10.92□□□□□ -0.66
CCDC171-203ENST00000449575 PTK7Q13308 1070 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 MBTPS1Q14703 1052 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 E2F4Q16254 413 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 OTUD6AQ7L8S5 288 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 KRT222Q8N1A0 295 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 VWCEQ96DN2 955 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 CALML4Q96GE6 196 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 DBR1Q9UK59 544 aaKnown RBP10.92□□□□□ -0.66
CCDC171-203ENST00000449575 DNM3Q9UQ16 869 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 KDM3AQ9Y4C1 1321 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
CCDC171-203ENST00000449575 TLR3O15455 904 aaKnown RBP10.92□□□□□ -0.66
CCDC171-203ENST00000449575 POLR2DO15514 142 aaKnown RBP10.92□□□□□ -0.66
CCDC171-203ENST00000449575 EYA4O95677 639 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 CHRNA1P02708 482 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 PFKFB1P16118 471 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 NDUFA8P51970 172 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 POLGP54098 1239 aaPredicted RBP10.92□□□□□ -0.66
CCDC171-203ENST00000449575 SLC12A3P55017 1021 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 NCBP1Q09161 790 aaKnown RBP10.92□□□□□ -0.66
CCDC171-203ENST00000449575 EMC2Q15006 297 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 TERF2Q15554 542 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 ARSHQ5FYA8 562 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 TMEM87AQ8NBN3 555 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 DHX58Q96C10 678 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 CDH23Q9H251 3354 aa10.92□□□□□ -0.66
CCDC171-203ENST00000449575 CSDE1O75534 798 aaKnown RBP10.91□□□□□ -0.66
CCDC171-203ENST00000449575 PLA2G4BP0C869 781 aa10.91□□□□□ -0.66
CCDC171-203ENST00000449575 MUTP22033 750 aa10.91□□□□□ -0.66
CCDC171-203ENST00000449575 CASP1P29466 404 aa10.91□□□□□ -0.66
CCDC171-203ENST00000449575 RINT1Q6NUQ1 792 aa10.91□□□□□ -0.66
CCDC171-203ENST00000449575 RAD54LQ92698 747 aa10.91□□□□□ -0.66
CCDC171-203ENST00000449575 MTRQ99707 1265 aa10.91□□□□□ -0.66
CCDC171-203ENST00000449575 NT5C3AQ9H0P0 336 aa10.91□□□□□ -0.66
CCDC171-203ENST00000449575 GINS2Q9Y248 185 aa10.91□□□□□ -0.66
CCDC171-203ENST00000449575 SMIM35A0A1B0GVV1 85 aa10.91□□□□□ -0.66
CCDC171-203ENST00000449575 ARHGEF35A5YM69 484 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms