RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 JPH2Q9BR39 696 aaPredicted RBP16.18■□□□□ 0.18
TNF-208ENST00000449264 FGFBP2Q9BYJ0 223 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 MRPL44Q9H9J2 332 aaKnown RBP16.18■□□□□ 0.18
TNF-208ENST00000449264 HDAC6Q9UBN7 1215 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 NRCAMQ92823 1304 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 MOXD2PA6NHM9 499 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 KBTBD13C9JR72 458 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 PLS3P13797 630 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 KLRC1P26715 233 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 PEX3P56589 373 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 DMP1Q13316 513 aaPredicted RBP16.18■□□□□ 0.18
TNF-208ENST00000449264 NBPF20Q3BBV1 942 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 KLHL10Q6JEL2 608 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 EFCAB12Q6NXP0 572 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 MTHFD1LQ6UB35 978 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 FAM178BQ8IXR5 827 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 EXOC8Q8IYI6 725 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 RETREG2Q8NC44 543 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 ARMC5Q96C12 935 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 LARSQ9P2J5 1176 aaKnown RBP16.18■□□□□ 0.18
TNF-208ENST00000449264 KIAA0100Q14667 2235 aaKnown RBP16.17■□□□□ 0.18
TNF-208ENST00000449264 C17orf102A2RUQ5 167 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 RRN3P2A6NIE6 340 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 K7ENM7 598 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 GAS2O43903 313 aaKnown RBP16.17■□□□□ 0.18
TNF-208ENST00000449264 GCNT3O95395 438 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 PSMD2Q13200 908 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 MARCH8Q5T0T0 291 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 L1TD1Q5T7N2 865 aaKnown RBP16.17■□□□□ 0.18
TNF-208ENST00000449264 NFRKBQ6P4R8 1299 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 ASAP3Q8TDY4 903 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 BSNDQ8WZ55 320 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 GLT1D1Q96MS3 346 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 SEL1LQ9UBV2 794 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 DACH1Q9UI36 760 aa16.17■□□□□ 0.18
TNF-208ENST00000449264 IGKV6-21A0A0C4DH24 114 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 CCDC169A6NNP5 214 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 MAGEB2O15479 319 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 CABYRO75952 493 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 MYBP10242 640 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 CD44P16070 742 aaKnown RBP16.16■□□□□ 0.18
TNF-208ENST00000449264 NMT1P30419 496 aaKnown RBP16.16■□□□□ 0.18
TNF-208ENST00000449264 CASP5P51878 434 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
TNF-208ENST00000449264 HIC1Q14526 733 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 GAS2L3Q86XJ1 694 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 MLKLQ8NB16 471 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 TCP11Q8WWU5 503 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 PSPC1Q8WXF1 523 aaKnown RBP16.16■□□□□ 0.18
TNF-208ENST00000449264 IFT74Q96LB3 600 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 TSEN34Q9BSV6 310 aaKnown RBP16.16■□□□□ 0.18
TNF-208ENST00000449264 KIFC3Q9BVG8 833 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 PRDM10Q9NQV6 1147 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 OLFML3Q9NRN5 406 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 CTNND2Q9UQB3 1225 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 PCDHA2Q9Y5H9 948 aa16.16■□□□□ 0.18
TNF-208ENST00000449264 A0A1W2PQ45 241 aaPredicted RBP16.15■□□□□ 0.18
TNF-208ENST00000449264 A0A1W2PQY0 241 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 DNM1LO00429 736 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 GJB1P08034 283 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 GLRA2P23416 452 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 ARL2P36404 184 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 PRCPP42785 496 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 DNM2P50570 870 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 ZNF200P98182 395 aaPredicted RBP16.15■□□□□ 0.18
TNF-208ENST00000449264 STIM1Q13586 685 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 IER5Q5VY09 327 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 RHPN2Q8IUC4 686 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 RNF214Q8ND24 703 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 PPP1R16BQ96T49 567 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 FAM49AQ9H0Q0 323 aaPredicted RBP16.15■□□□□ 0.18
TNF-208ENST00000449264 SUCLA2Q9P2R7 463 aaPredicted RBP16.15■□□□□ 0.18
TNF-208ENST00000449264 OGDHLQ9ULD0 1010 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 AKT3Q9Y243 479 aa16.15■□□□□ 0.18
TNF-208ENST00000449264 LRRIQ4A6NIV6 560 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 PPP1R3GB7ZBB8 358 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 SLC16A4O15374 487 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 TREHO43280 583 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 GNAT1P11488 350 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 TMOD1P28289 359 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 NPTX2P47972 431 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 ZNF165P49910 485 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 KSR1Q8IVT5 923 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 U2AF1L4Q8WU68 220 aaKnown RBP16.14■□□□□ 0.18
TNF-208ENST00000449264 PRPF31Q8WWY3 499 aaKnown RBP16.14■□□□□ 0.18
TNF-208ENST00000449264 ZNF668Q96K58 619 aaPredicted RBP16.14■□□□□ 0.18
TNF-208ENST00000449264 FIZ1Q96SL8 496 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 MAP7D2Q96T17 732 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 GTPBP4Q9BZE4 634 aaKnown RBP16.14■□□□□ 0.18
TNF-208ENST00000449264 NAT10Q9H0A0 1025 aaKnown RBP16.14■□□□□ 0.18
TNF-208ENST00000449264 C17orf75Q9HAS0 396 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 KMT5AQ9NQR1 393 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 STARD7Q9NQZ5 370 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 GTF2IRD1Q9UHL9 959 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 PHF24Q9UPV7 400 aa16.14■□□□□ 0.18
TNF-208ENST00000449264 TFRCP02786 760 aaKnown RBP16.14■□□□□ 0.17
TNF-208ENST00000449264 VTNP04004 478 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 CYP2C9P11712 490 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 SMTNP53814 917 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 RTP1P59025 263 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms