RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 ARL2P36404 184 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 THPOP40225 353 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 PTK7Q13308 1070 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 CUL4BQ13620 913 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 GIT2Q14161 759 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 RETREG2Q8NC44 543 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 PRPF31Q8WWY3 499 aaKnown RBP13.16□□□□□ -0.3
RCL1-208ENST00000448872 TOX2Q96NM4 488 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 PYM1Q9BRP8 204 aaKnown RBP13.16□□□□□ -0.3
RCL1-208ENST00000448872 SEZ6LQ9BYH1 1024 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 POLR3FQ9H1D9 316 aaPredicted RBP13.16□□□□□ -0.3
RCL1-208ENST00000448872 TNMDQ9H2S6 317 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 AKT3Q9Y243 479 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 PPME1Q9Y570 386 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 MROH7Q68CQ1 1323 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 TRIM43BA6NCK2 446 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 KRT18P05783 430 aaKnown RBP13.15□□□□□ -0.3
RCL1-208ENST00000448872 GLRA2P23416 452 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 ITGB8P26012 769 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 TAF2Q6P1X5 1199 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 RHPN2Q8IUC4 686 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 MCPH1Q8NEM0 835 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 TRIM43Q96BQ3 446 aaPredicted RBP13.15□□□□□ -0.3
RCL1-208ENST00000448872 DNAJC19Q96DA6 116 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 OSBPL7Q9BZF2 842 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 TRIM9Q9C026 710 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 CDHR5Q9HBB8 845 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 PRDM5Q9NQX1 630 aaPredicted RBP13.15□□□□□ -0.3
RCL1-208ENST00000448872 USP25Q9UHP3 1055 aa13.15□□□□□ -0.3
RCL1-208ENST00000448872 SCN10AQ9Y5Y9 1956 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 TLR3O15455 904 aaKnown RBP13.14□□□□□ -0.31
RCL1-208ENST00000448872 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
RCL1-208ENST00000448872 CLTBP09497 229 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 CKBP12277 381 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 TMOD1P28289 359 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 MDM2Q00987 491 aaPredicted RBP13.14□□□□□ -0.31
RCL1-208ENST00000448872 LAMTOR4Q0VGL1 99 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 PNOCQ13519 176 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 CAMK4Q16566 473 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 KIZQ2M2Z5 673 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 ZNF618Q5T7W0 954 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 IER5Q5VY09 327 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 TRAF7Q6Q0C0 670 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 C7orf61Q8IZ16 206 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 JPH2Q9BR39 696 aaPredicted RBP13.14□□□□□ -0.31
RCL1-208ENST00000448872 KIFC3Q9BVG8 833 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 NOC4LQ9BVI4 516 aaKnown RBP13.14□□□□□ -0.31
RCL1-208ENST00000448872 PPP1R12CQ9BZL4 782 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 ZHX3Q9H4I2 956 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 MAGEF1Q9HAY2 307 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 TMEM39AQ9NV64 488 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 TBX21Q9UL17 535 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 GINS2Q9Y248 185 aa13.14□□□□□ -0.31
RCL1-208ENST00000448872 GPR32O75388 356 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 CHRNA1P02708 482 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 SRGAP2CP0DJJ0 459 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 IDEP14735 1019 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 CYP2C18P33260 490 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 DNM2P50570 870 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 NLRP11P59045 1033 aaKnown RBP13.13□□□□□ -0.31
RCL1-208ENST00000448872 ASIC1P78348 528 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 CAPSQ13938 189 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 NFKBIBQ15653 356 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 EXOC8Q8IYI6 725 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 TCP11Q8WWU5 503 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 PSPC1Q8WXF1 523 aaKnown RBP13.13□□□□□ -0.31
RCL1-208ENST00000448872 HPS3Q969F9 1004 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 NLRP4Q96MN2 994 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 MAP7D2Q96T17 732 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 ADAMTS10Q9H324 1103 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 HIPK3Q9H422 1215 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 KCND2Q9NZV8 630 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 COL4A3BPQ9Y5P4 624 aa13.13□□□□□ -0.31
RCL1-208ENST00000448872 GTPBP6O43824 516 aaPredicted RBP13.12□□□□□ -0.31
RCL1-208ENST00000448872 GAS2O43903 313 aaKnown RBP13.12□□□□□ -0.31
RCL1-208ENST00000448872 CSDE1O75534 798 aaKnown RBP13.12□□□□□ -0.31
RCL1-208ENST00000448872 FAM13AO94988 1023 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 GPC3P51654 580 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 CCL23P55773 120 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 PEX3P56589 373 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 MRPS6P82932 125 aaKnown RBP13.12□□□□□ -0.31
RCL1-208ENST00000448872 AMPD3Q01432 767 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 MGAT3Q09327 533 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 DPYDQ12882 1025 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 POSTNQ15063 836 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 RPAINQ86UA6 219 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 RNF149Q8NC42 400 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 TMEM40Q8WWA1 233 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 KIFAP3Q92845 792 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 DRC1Q96MC2 740 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 OSMRQ99650 979 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 FGFBP2Q9BYJ0 223 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 WNT8AQ9H1J5 351 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 TBC1D7Q9P0N9 293 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 CDY2AQ9Y6F7 541 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
RCL1-208ENST00000448872 ADGRA3Q8IWK6 1321 aa13.12□□□□□ -0.31
RCL1-208ENST00000448872 A0A087WZ62 844 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms