RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 DHX33Q9H6R0 707 aaKnown RBP14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 CHD7Q9P2D1 2997 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 SMC3Q9UQE7 1217 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 MTCH2Q9Y6C9 303 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 COL4A4P53420 1690 aaPredicted RBP14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 COL4A6Q14031 1691 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 A0A087WZ62 844 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 DENND3A2RUS2 1198 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 C9IYK1 514 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 OR52Z1P0C646 297 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 SPATA31C1P0DKV0 1188 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 SARSP49591 514 aaKnown RBP14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 POLGP54098 1239 aaPredicted RBP14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 FAM189BP81408 668 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 EPC2Q52LR7 807 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 MCTP1Q6DN14 999 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 SLC24A5Q71RS6 500 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 RHPN2Q8IUC4 686 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 NPAS4Q8IUM7 802 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 EXOC8Q8IYI6 725 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 FIBCD1Q8N539 461 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 NEK9Q8TD19 979 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 SLC7A3Q8WY07 619 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 SCLT1Q96NL6 688 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 FDXACB1Q9BRP7 624 aaPredicted RBP14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 RC3H2Q9HBD1 1191 aaKnown RBP14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 ANKEF1Q9NU02 776 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 PPME1Q9Y570 386 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 PCDHB7Q9Y5E2 793 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 PCDHB6Q9Y5E3 794 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 RALGAPA2Q2PPJ7 1873 aa14.24□□□□□ -0.13
PRPF40A-203ENST00000448428 FNDC1Q4ZHG4 1894 aaPredicted RBP14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 H3BQV1 296 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 STAG3L1P0CL83 205 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 IBSPP21815 317 aaPredicted RBP14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 FGFR4P22455 802 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 RFC5P40937 340 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 CUL4AQ13619 759 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 BTG3Q14201 252 aaPredicted RBP14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 LARP1BQ659C4 914 aaKnown RBP14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 CATSPER3Q86XQ3 398 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 TMEM192Q8IY95 271 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 MICALL1Q8N3F8 863 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 FBXO22Q8NEZ5 403 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 PIGOQ8TEQ8 1089 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 GDPD5Q8WTR4 605 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 PRPF31Q8WWY3 499 aaKnown RBP14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 TMEM143Q96AN5 459 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 SAMD11Q96NU1 681 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 GCOM2Q9BZD3 368 aaPredicted RBP14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 C1orf112Q9NSG2 853 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 BMP2KQ9NSY1 1161 aaPredicted RBP14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 LRFN2Q9ULH4 789 aa14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 PRRC2BQ5JSZ5 2229 aaKnown RBP14.23□□□□□ -0.13
PRPF40A-203ENST00000448428 ADGRA3Q8IWK6 1321 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 GTPBP6O43824 516 aaPredicted RBP14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 MED24O75448 989 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 LINC00271P0C7V0 271 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 XRCC6P12956 609 aaKnown RBP eCLIP14.22□□□□□ -0.136e-6■■■■■ 31.4
PRPF40A-203ENST00000448428 GATMP50440 423 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 PTGDRQ13258 359 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 EMC2Q15006 297 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 ZNF410Q86VK4 478 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 NLRP4Q96MN2 994 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 POLR3CQ9BUI4 534 aaPredicted RBP14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 IFT122Q9HBG6 1241 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 TUFT1Q9NNX1 390 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 PRDM6Q9NQX0 595 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 COL4A3BPQ9Y5P4 624 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 KIAA1671Q9BY89 1806 aa14.22□□□□□ -0.13
PRPF40A-203ENST00000448428 EYSQ5T1H1 3165 aa14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 SRGAP2CP0DJJ0 459 aa14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 ZSCAN20P17040 1043 aaPredicted RBP14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 BMPR1AP36894 532 aa14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 FXR2P51116 673 aaKnown RBP eCLIP14.21□□□□□ -0.135e-9■■■□□ 17
PRPF40A-203ENST00000448428 LAMTOR4Q0VGL1 99 aa14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 FAM102BQ5T8I3 360 aa14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 CMTR2Q8IYT2 770 aaKnown RBP14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 TCP11Q8WWU5 503 aa14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 PSPC1Q8WXF1 523 aaKnown RBP14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 CLP1Q92989 425 aaKnown RBP14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 INO80BQ9C086 356 aaPredicted RBP14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 XPNPEP1Q9NQW7 623 aa14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 LMCD1Q9NZU5 365 aa14.21□□□□□ -0.13
PRPF40A-203ENST00000448428 H3BNC9 293 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 GAS2O43903 313 aaKnown RBP14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 RPA1P27694 616 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 RARRES1P49788 294 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 GPM6BQ13491 265 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 PDIA5Q14554 519 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 IL17AQ16552 155 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 PAN2Q504Q3 1202 aaKnown RBP14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 RILPL1Q5EBL4 403 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 FERMT3Q86UX7 667 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 ERMNQ8TAM6 284 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 NACC1Q96RE7 527 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 MTRQ99707 1265 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms