RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
SCAP-208ENST00000448217 RAD51AP2Q09MP3 1159 aa13.18□□□□□ -0.3
SCAP-208ENST00000448217 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
SCAP-208ENST00000448217 ALCAMQ13740 583 aa13.18□□□□□ -0.3
SCAP-208ENST00000448217 BMT2Q1RMZ1 405 aa13.18□□□□□ -0.3
SCAP-208ENST00000448217 MARCH8Q5T0T0 291 aa13.18□□□□□ -0.3
SCAP-208ENST00000448217 SFR1Q86XK3 245 aa13.18□□□□□ -0.3
SCAP-208ENST00000448217 ADSSL1Q8N142 457 aa13.18□□□□□ -0.3
SCAP-208ENST00000448217 GUF1Q8N442 669 aaKnown RBP13.18□□□□□ -0.3
SCAP-208ENST00000448217 RETREG2Q8NC44 543 aa13.18□□□□□ -0.3
SCAP-208ENST00000448217 KIAA0895Q8NCT3 520 aa13.18□□□□□ -0.3
SCAP-208ENST00000448217 CRISPLD2Q9H0B8 497 aa13.18□□□□□ -0.3
SCAP-208ENST00000448217 PHF24Q9UPV7 400 aa13.18□□□□□ -0.3
SCAP-208ENST00000448217 TRIP12Q14669 1992 aaPredicted RBP13.18□□□□□ -0.3
SCAP-208ENST00000448217 UBE4BO95155 1302 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 DNM1LO00429 736 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCAP-208ENST00000448217 ASAP2O43150 1006 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 PPP1R37O75864 691 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 KIF20AO95235 890 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 GNAT1P11488 350 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 KLRC1P26715 233 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 ACLYP53396 1101 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 NCKAP1LP55160 1127 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
SCAP-208ENST00000448217 POU5F1BQ06416 359 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 MXD4Q14582 209 aaPredicted RBP13.17□□□□□ -0.3
SCAP-208ENST00000448217 PPP2R5AQ15172 486 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 MTFR1Q15390 333 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 ANO6Q4KMQ2 910 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 ODR4Q5SWX8 454 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 FAM102BQ5T8I3 360 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 NFRKBQ6P4R8 1299 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 MTHFD1LQ6UB35 978 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 CXCL17Q6UXB2 119 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 TRMT1LQ7Z2T5 733 aaKnown RBP13.17□□□□□ -0.3
SCAP-208ENST00000448217 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 MYCT1Q8N699 235 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 SLC43A3Q8NBI5 491 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 LMBR1Q8WVP7 490 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 HVCN1Q96D96 273 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 DHTKD1Q96HY7 919 aaPredicted RBP13.17□□□□□ -0.3
SCAP-208ENST00000448217 NAT10Q9H0A0 1025 aaKnown RBP13.17□□□□□ -0.3
SCAP-208ENST00000448217 GPRC5CQ9NQ84 441 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 GDAQ9Y2T3 454 aa13.17□□□□□ -0.3
SCAP-208ENST00000448217 SIP14410 1827 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 SMIM35A0A1B0GVV1 85 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 SFI1A8K8P3 1242 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 H0YCG3 227 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 RPLP2P05387 115 aaKnown RBP13.16□□□□□ -0.3
SCAP-208ENST00000448217 GJB1P08034 283 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
SCAP-208ENST00000448217 PRCPP42785 496 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 NAMPTP43490 491 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 DNM2P50570 870 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 GTF2BQ00403 316 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 CDC42EP1Q00587 391 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 STIM1Q13586 685 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 NBPF20Q3BBV1 942 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 ISM2Q6H9L7 571 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 C11orf57Q6ZUT1 292 aaPredicted RBP13.16□□□□□ -0.3
SCAP-208ENST00000448217 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 GAS2L3Q86XJ1 694 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 FAM178BQ8IXR5 827 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 ZNF507Q8TCN5 953 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 FAM200AQ8TCP9 573 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 TRAPPC12Q8WVT3 735 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 IFT74Q96LB3 600 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 NFKBIZQ9BYH8 718 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 RNF208Q9H0X6 261 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 POLR3FQ9H1D9 316 aaPredicted RBP13.16□□□□□ -0.3
SCAP-208ENST00000448217 DNAJC25Q9H1X3 360 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 SLC39A2Q9NP94 309 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 SETD4Q9NVD3 440 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 GTF2IRD1Q9UHL9 959 aa13.16□□□□□ -0.3
SCAP-208ENST00000448217 GRIN2DO15399 1336 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 PHLPP2Q6ZVD8 1323 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 C17orf102A2RUQ5 167 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 IKBKBO14920 756 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 GLRA2P23416 452 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 TMOD1P28289 359 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 NPTX2P47972 431 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 ZNF165P49910 485 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 SMTNP53814 917 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 DMP1Q13316 513 aaPredicted RBP13.15□□□□□ -0.3
SCAP-208ENST00000448217 IQCB1Q15051 598 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 CENPPQ6IPU0 288 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 EFCAB12Q6NXP0 572 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 RPAINQ86UA6 219 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
SCAP-208ENST00000448217 MYOCDQ8IZQ8 938 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 C7orf31Q8N865 590 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 TMEM161BQ8NDZ6 487 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 ASAP3Q8TDY4 903 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 SCFD1Q8WVM8 642 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 PSPC1Q8WXF1 523 aaKnown RBP13.15□□□□□ -0.3
SCAP-208ENST00000448217 BSNDQ8WZ55 320 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 HPS3Q969F9 1004 aa13.15□□□□□ -0.3
SCAP-208ENST00000448217 TMEM143Q96AN5 459 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms