RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 NAP1L4Q99733 375 aaKnown RBP12.49□□□□□ -0.41
GNE-203ENST00000447283 FGFBP2Q9BYJ0 223 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 PPP1R9AQ9ULJ8 1098 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 PCDHA12Q9UN75 941 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 FRMD3A2A2Y4 597 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 SRRM3A6NNA2 597 aaPredicted RBP12.48□□□□□ -0.41
GNE-203ENST00000447283 HMGB1P1B2RPK0 211 aaPredicted RBP12.48□□□□□ -0.41
GNE-203ENST00000447283 FDX1P10109 184 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 NR1D1P20393 614 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 LIG3P49916 1009 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 PPIL2Q13356 520 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 COG2Q14746 738 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 KCTD16Q68DU8 428 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 MMS22LQ6ZRQ5 1243 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 SCFD1Q8WVM8 642 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 OPTNQ96CV9 577 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 ATP6V1G3Q96LB4 118 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 RNPC3Q96LT9 517 aaKnown RBP12.48□□□□□ -0.41
GNE-203ENST00000447283 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.48□□□□□ -0.41
GNE-203ENST00000447283 PACSIN1Q9BY11 444 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 GBA2Q9HCG7 927 aaPredicted RBP12.48□□□□□ -0.41
GNE-203ENST00000447283 ADAMTS1Q9UHI8 967 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 ATP8B3O60423 1300 aa12.48□□□□□ -0.41
GNE-203ENST00000447283 USP17L15C9J2P7 530 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 USP17L13C9JLJ4 530 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 BHMG1C9JSJ3 638 aaPredicted RBP12.47□□□□□ -0.41
GNE-203ENST00000447283 USP17L11C9JVI0 530 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 USP17L18D6R9N7 530 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 USP17L22D6RA61 530 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 USP17L17D6RBQ6 530 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 USP17L19D6RCP7 530 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 USP17L20D6RJB6 530 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 RAD51CO43502 376 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 CELF2O95319 508 aaKnown RBP12.47□□□□□ -0.41
GNE-203ENST00000447283 LSP1P33241 339 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 USP11P51784 963 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 USP17L24Q0WX57 530 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 UBE2SQ16763 222 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 DPY19L2P1Q6NXN4 242 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 LRIG3Q6UXM1 1119 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 CATSPERGQ6ZRH7 1159 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 NELFCDQ8IXH7 590 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 FAM133AQ8N9E0 248 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 TAF4BQ92750 862 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 PBKQ96KB5 322 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 ISCUQ9H1K1 167 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 EPN3Q9H201 632 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 RABEP2Q9H5N1 569 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 PLCB1Q9NQ66 1216 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 PACSIN2Q9UNF0 486 aaPredicted RBP12.47□□□□□ -0.41
GNE-203ENST00000447283 CTDP1Q9Y5B0 961 aaPredicted RBP12.47□□□□□ -0.41
GNE-203ENST00000447283 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
GNE-203ENST00000447283 ZBED4O75132 1171 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
GNE-203ENST00000447283 PLA2G4BP0C869 781 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 ATP1A2P50993 1020 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 GUCY2FP51841 1108 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 KCNH2Q12809 1159 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 ADAM9Q13443 819 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 RPS6KA1Q15418 735 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 IRF2BP2Q7Z5L9 587 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 ACTRT1Q8TDG2 376 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 SCFD2Q8WU76 684 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 KAT2BQ92831 832 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 CALR3Q96L12 384 aaKnown RBP12.47□□□□□ -0.41
GNE-203ENST00000447283 SLC38A10Q9HBR0 1119 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 HOXC10Q9NYD6 342 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 TBC1D7Q9P0N9 293 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 KCNH4Q9UQ05 1017 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 SAMM50Q9Y512 469 aa12.47□□□□□ -0.41
GNE-203ENST00000447283 A0A0G2JLL6 359 aaPredicted RBP12.46□□□□□ -0.41
GNE-203ENST00000447283 E9PMD0 336 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 CETN3O15182 167 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 PPP1R37O75864 691 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 KIF4AO95239 1232 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 ICAM1P05362 532 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 SSBP05455 408 aaKnown RBP eCLIP12.46□□□□□ -0.41
GNE-203ENST00000447283 CYP11B2P19099 503 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 ANXA13P27216 316 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 DSG3P32926 999 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 DNA2P51530 1060 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 ARID5AQ03989 594 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 CUL1Q13616 776 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 IFI16Q16666 785 aaKnown RBP12.46□□□□□ -0.41
GNE-203ENST00000447283 HERC4Q5GLZ8 1057 aaPredicted RBP12.46□□□□□ -0.41
GNE-203ENST00000447283 PRRT2Q7Z6L0 340 aaPredicted RBP12.46□□□□□ -0.41
GNE-203ENST00000447283 YTHDF3Q7Z739 585 aaKnown RBP12.46□□□□□ -0.41
GNE-203ENST00000447283 GPBP1Q86WP2 473 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 LRRC57Q8N9N7 239 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 PROCA1Q8NCQ7 364 aaPredicted RBP12.46□□□□□ -0.41
GNE-203ENST00000447283 PNMA2Q9UL42 364 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 KIAA1024Q9UPX6 916 aa12.46□□□□□ -0.41
GNE-203ENST00000447283 MRPL11Q9Y3B7 192 aaKnown RBP12.46□□□□□ -0.41
GNE-203ENST00000447283 PHIPQ8WWQ0 1821 aa12.46□□□□□ -0.42
GNE-203ENST00000447283 VWA5AO00534 786 aa12.46□□□□□ -0.42
GNE-203ENST00000447283 MARCH6O60337 910 aa12.46□□□□□ -0.42
GNE-203ENST00000447283 GTF2A1P52655 376 aaPredicted RBP12.46□□□□□ -0.42
GNE-203ENST00000447283 ERVK-9P63128 1117 aa12.46□□□□□ -0.42
GNE-203ENST00000447283 PTK2Q05397 1052 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms