RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 REV1Q9UBZ9 1251 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 HERC5Q9UII4 1024 aaKnown RBP9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 ZNF281Q9Y2X9 895 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 MAST2Q6P0Q8 1798 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 FAM221AA4D161 298 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 NOTOA8MTQ0 251 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 RFXAPO00287 272 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 CXCL11O14625 94 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 CTNND1O60716 968 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 IDH1O75874 414 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 ST13P50502 369 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 SNAPC2Q13487 334 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 PKN2Q16513 984 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 CLEC16AQ2KHT3 1053 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 FOXP4Q8IVH2 680 aaPredicted RBP9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 TEX11Q8IYF3 940 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 CCDC74BQ96LY2 380 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 OSBPL5Q9H0X9 879 aaPredicted RBP9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 PI4KBQ9UBF8 816 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 KLHL3Q9UH77 587 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 OTOFQ9HC10 1997 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 CASP8AP2Q9UKL3 1982 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 ADAMTS20P59510 1910 aa9.35□□□□□ -0.91
SMARCE1-206ENST00000447024 DOCK2Q92608 1830 aa9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 OR14I1A6ND48 311 aa9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 CHURC1-FNTBB4DL54 471 aa9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 EFEMP2O95967 443 aa9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 HDAC1Q13547 482 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 TAF1CQ15572 869 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 LRRFIP1Q32MZ4 808 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 ZSCAN25Q6NSZ9 544 aa9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 METTL16Q86W50 562 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 GATAD2BQ8WXI9 593 aa9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 HAUS7Q99871 368 aa9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 DDX4Q9NQI0 724 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 PIH1D3Q9NQM4 214 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-206ENST00000447024 DDTLA6NHG4 134 aaPredicted RBP9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 FOXD2O60548 495 aaPredicted RBP9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 TRIM13O60858 407 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 F13A1P00488 732 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 HLA-DOAP06340 250 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 PICALMQ13492 652 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 ARHGEF6Q15052 776 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 ADGRF1Q5T601 910 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 MIGA2Q7L4E1 593 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 NLRX1Q86UT6 975 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 TICAM2Q86XR7 235 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 SCYL3Q8IZE3 742 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 ZKSCAN4Q969J2 545 aaPredicted RBP9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 GCC1Q96CN9 775 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 YTHDC1Q96MU7 727 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 ECHDC1Q9NTX5 307 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 PAG1Q9NWQ8 432 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 AATFQ9NY61 560 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 FZD1Q9UP38 647 aa9.33□□□□□ -0.92
SMARCE1-206ENST00000447024 TTC41PQ6P2S7 1318 aa9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 MYO5AQ9Y4I1 1855 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 CCL15-CCL14A0A0B4J2E2 113 aa9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 ERC2O15083 957 aa9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 FKTNO75072 461 aa9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 LMNB2Q03252 620 aa9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 CAMK2GQ13555 558 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 CCL15Q16663 113 aa9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 SLC9C2Q5TAH2 1124 aa9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 FASTKD5Q7L8L6 764 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 CTU1Q7Z7A3 348 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 ZFPM1Q8IX07 1006 aa9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 MAGEB6Q8N7X4 407 aa9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 SH3RF3Q8TEJ3 882 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 CRNKL1Q9BZJ0 848 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 MBD1Q9UIS9 605 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 SLC45A1Q9Y2W3 748 aa9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 POLR3KQ9Y2Y1 108 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-206ENST00000447024 FLT1P17948 1338 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 FOCADQ5VW36 1801 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 GOLIM4O00461 696 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 DNAJA2O60884 412 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 PF4P02776 101 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 ZFYP08048 801 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 PDE6AP16499 860 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 PI3P19957 117 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 UBE3CQ15386 1083 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 ANKRD23Q86SG2 305 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 TMEM151BQ8IW70 566 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 PHACTR4Q8IZ21 702 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 TGFBRAP1Q8WUH2 860 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 BRI3BPQ8WY22 251 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 VWCEQ96DN2 955 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 ANTXR1Q9H6X2 564 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 PARP2Q9UGN5 583 aa9.31□□□□□ -0.92
SMARCE1-206ENST00000447024 TCRBV5S4A2TA0A5A2 114 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 GLRX3O76003 335 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 HTR3BO95264 441 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 TBC1D8O95759 1140 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 ASNSP08243 561 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 RPL10P27635 214 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 ADD2P35612 726 aa9.3□□□□□ -0.92
SMARCE1-206ENST00000447024 SRSF3P84103 164 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms