RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 FSCN1Q16658 493 aaKnown RBP5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 ZNF827Q17R98 1081 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 BRDTQ58F21 947 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 ODR4Q5SWX8 454 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 TRIM68Q6AZZ1 485 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 MCTP2Q6DN12 878 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 BMP8AQ7Z5Y6 402 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 FERMT3Q86UX7 667 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 KLHL36Q8N4N3 616 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 AHCYL2Q96HN2 611 aaKnown RBP5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 ACAP3Q96P50 834 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 ASPSCR1Q9BZE9 553 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 MTG2Q9H4K7 406 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 PRDM12Q9H4Q4 367 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 MYH16Q9H6N6 1097 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 C14orf119Q9NWQ9 140 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 Q9UFV3 132 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 NUMBLQ9Y6R0 609 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 OPHN1O60890 802 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 ADCY8P40145 1251 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 GPR3P46089 330 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 JAG1P78504 1218 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 KLF1Q13351 362 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 RGL3Q3MIN7 710 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 PITRM1Q5JRX3 1037 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 SYDE2Q5VT97 1194 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 SIAH1Q8IUQ4 282 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 FMNL3Q8IVF7 1028 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 ZSCAN18Q8TBC5 510 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 RPGRQ92834 1020 aaKnown RBP5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 NKD2Q969F2 451 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 CEP89Q96ST8 783 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 ANO3Q9BYT9 981 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 TMEM168Q9H0V1 697 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 MYPNQ86TC9 1320 aa5.93□□□□□ -1.46
HMGB1P48-201ENST00000446155 A0A0A6YYK5 440 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 TRIM75PA6NK02 468 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 FZD9O00144 591 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 GABRDO14764 452 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 CELA3BP08861 270 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 CLEC2LP0C7M8 214 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 ENPP1P22413 925 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 MAP3K12Q12852 859 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 TRIM25Q14258 630 aaKnown RBP5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 LARP4Q71RC2 724 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 MARCH10Q8NA82 808 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 PPP1R14CQ8TAE6 165 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 WDR48Q8TAF3 677 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 FERMT2Q96AC1 680 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 LCORQ96JN0 433 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 KCNC2Q96PR1 638 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 SOX7Q9BT81 388 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 CCDC8Q9H0W5 538 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 TRHDEQ9UKU6 1024 aa5.92□□□□□ -1.46
HMGB1P48-201ENST00000446155 APOL3O95236 402 aa5.91□□□□□ -1.46
HMGB1P48-201ENST00000446155 ZSCAN22P10073 491 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P48-201ENST00000446155 KCNC1P48547 511 aa5.91□□□□□ -1.46
HMGB1P48-201ENST00000446155 DGKDQ16760 1214 aa5.91□□□□□ -1.46
HMGB1P48-201ENST00000446155 CT83Q5H943 113 aa5.91□□□□□ -1.46
HMGB1P48-201ENST00000446155 GORABQ5T7V8 394 aa5.91□□□□□ -1.46
HMGB1P48-201ENST00000446155 KCNK18Q7Z418 384 aa5.91□□□□□ -1.46
HMGB1P48-201ENST00000446155 SP8Q8IXZ3 490 aa5.91□□□□□ -1.46
HMGB1P48-201ENST00000446155 RSAD2Q8WXG1 361 aa5.91□□□□□ -1.46
HMGB1P48-201ENST00000446155 GABBR1Q9UBS5 961 aa5.91□□□□□ -1.46
HMGB1P48-201ENST00000446155 CDC42EP3Q9UKI2 254 aa5.91□□□□□ -1.46
HMGB1P48-201ENST00000446155 MROH6A6NGR9 719 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 GOLGA8AA7E2F4 631 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 GOLGA8BA8MQT2 603 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 H2AFYO75367 372 aaKnown RBP5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 PEX14O75381 377 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 SEC24DO94855 1032 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 CYP1A1P04798 512 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 ZNF888P0CJ79 500 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 IARSP41252 1262 aaKnown RBP5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 KCNQ1P51787 676 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 SCAND1P57086 179 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 EXOSC10Q01780 885 aaKnown RBP5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 CCDC62Q6P9F0 684 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 OTOP2Q7RTS6 562 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 EXOC8Q8IYI6 725 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 IFNL2Q8IZJ0 200 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 SYT8Q8NBV8 401 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 EAF2Q96CJ1 260 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 MTMR8Q96EF0 704 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 KCTD10Q9H3F6 313 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 BARX1Q9HBU1 254 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 CCM2LQ9NUG4 571 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 PTPN22Q9Y2R2 807 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 VWA7Q9Y334 891 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 PCDHB6Q9Y5E3 794 aa5.9□□□□□ -1.46
HMGB1P48-201ENST00000446155 ST20-MTHFSA0A0A6YYL1 179 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 B4GALT3O60512 393 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 PCDH8O95206 1070 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 HMGCRP04035 888 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 MTNR1BP49286 362 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 GPR15P49685 360 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms