RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 TMEM47Q9BQJ4 181 aa10.86□□□□□ -0.67
CASP4-203ENST00000444739 RAB34Q9BZG1 259 aa10.86□□□□□ -0.67
CASP4-203ENST00000444739 STMN4Q9H169 189 aaPredicted RBP10.86□□□□□ -0.67
CASP4-203ENST00000444739 CARD9Q9H257 536 aa10.86□□□□□ -0.67
CASP4-203ENST00000444739 OSGEPQ9NPF4 335 aa10.86□□□□□ -0.67
CASP4-203ENST00000444739 MCM9Q9NXL9 1143 aa10.86□□□□□ -0.67
CASP4-203ENST00000444739 PRKAG3Q9UGI9 489 aa10.86□□□□□ -0.67
CASP4-203ENST00000444739 HDAC9Q9UKV0 1011 aa10.86□□□□□ -0.67
CASP4-203ENST00000444739 THRAP3Q9Y2W1 955 aaKnown RBP10.86□□□□□ -0.67
CASP4-203ENST00000444739 ARL2BPQ9Y2Y0 163 aa10.86□□□□□ -0.67
CASP4-203ENST00000444739 RASGRF2O14827 1237 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 RIPK2O43353 540 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 AP1G2O75843 785 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 TDP2O95551 362 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 GNAZP19086 355 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 ATP4AP20648 1035 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 RPL21P46778 160 aaKnown RBP10.85□□□□□ -0.67
CASP4-203ENST00000444739 PPATQ06203 517 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 UBE4AQ14139 1066 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 LRRC14Q15048 493 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 DIXDC1Q155Q3 683 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 EDRF1Q3B7T1 1238 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 CCDC38Q502W7 563 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 BARGINQ6ZT62 677 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 SPATA21Q7Z572 469 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 VPS36Q86VN1 386 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 KCNV2Q8TDN2 545 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 U2AF1L4Q8WU68 220 aaKnown RBP10.85□□□□□ -0.67
CASP4-203ENST00000444739 DYNLL2Q96FJ2 89 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 FAM84BQ96KN1 310 aaPredicted RBP10.85□□□□□ -0.67
CASP4-203ENST00000444739 NAP1L3Q99457 506 aaPredicted RBP10.85□□□□□ -0.67
CASP4-203ENST00000444739 PLCD4Q9BRC7 762 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 DBR1Q9UK59 544 aaKnown RBP10.85□□□□□ -0.67
CASP4-203ENST00000444739 TAF1P21675 1872 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 BCL9O00512 1426 aa10.85□□□□□ -0.67
CASP4-203ENST00000444739 CETN3O15182 167 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 AFPP02771 609 aaKnown RBP10.84□□□□□ -0.67
CASP4-203ENST00000444739 FGFR4P22455 802 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 IL6STP40189 918 aaPredicted RBP10.84□□□□□ -0.67
CASP4-203ENST00000444739 SKIV2L2P42285 1042 aaKnown RBP10.84□□□□□ -0.67
CASP4-203ENST00000444739 NT5C2P49902 561 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 RAB27AP51159 221 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 PRPF4BQ13523 1007 aaKnown RBP10.84□□□□□ -0.67
CASP4-203ENST00000444739 EXOC3L4Q17RC7 722 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 SOGA3Q5TF21 947 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 C12orf60Q5U649 245 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 ANKLE1Q8NAG6 615 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 LNX1Q8TBB1 728 aaPredicted RBP10.84□□□□□ -0.67
CASP4-203ENST00000444739 UTP4Q969X6 686 aaKnown RBP10.84□□□□□ -0.67
CASP4-203ENST00000444739 RMDN2Q96LZ7 410 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 CCDC113Q9H0I3 377 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 SIX2Q9NPC8 291 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.84□□□□□ -0.67
CASP4-203ENST00000444739 RASAL2Q9UJF2 1139 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 LRRC42Q9Y546 428 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 PCDHA3Q9Y5H8 950 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 IGSF9BQ9UPX0 1349 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 ESYT2A0FGR8 921 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 DPPA5A6NC42 116 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 NR2F2P24468 414 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 PDE6BP35913 854 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 CTCFP49711 727 aaPredicted RBP10.84□□□□□ -0.67
CASP4-203ENST00000444739 MGAT5Q09328 741 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 ZNF211Q13398 564 aaPredicted RBP10.84□□□□□ -0.67
CASP4-203ENST00000444739 EPHA7Q15375 998 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 CAVIN4Q5BKX8 364 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 NUGGCQ68CJ6 796 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 ANO7Q6IWH7 933 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 VSTM1Q6UX27 236 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 FRMD5Q7Z6J6 570 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 SLC30A5Q8TAD4 765 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 SLC35G2Q8TBE7 412 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 DYDC1Q8WWB3 177 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 RFFLQ8WZ73 363 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 C18orf8Q96DM3 657 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 NLRP3Q96P20 1036 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 EMILIN3Q9NT22 766 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 NKX1-2Q9UD57 310 aaPredicted RBP10.84□□□□□ -0.67
CASP4-203ENST00000444739 ROBO3Q96MS0 1386 aa10.84□□□□□ -0.67
CASP4-203ENST00000444739 PHF2O75151 1096 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 TSPY3P0CV98 308 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 TSPY8P0CW00 308 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 NEFHP12036 1026 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 VCAM1P19320 739 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 GBP1P32455 592 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 CGB2Q6NT52 195 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 SLC30A9Q6PML9 568 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 MAEAQ7L5Y9 396 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 CCDC65Q8IXS2 484 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 MGARPQ8TDB4 240 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 ALG3Q92685 438 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 ROPN1BQ9BZX4 212 aaPredicted RBP10.83□□□□□ -0.68
CASP4-203ENST00000444739 ROPN1Q9HAT0 212 aaPredicted RBP10.83□□□□□ -0.68
CASP4-203ENST00000444739 PRDM11Q9NQV5 511 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 MTRF1LQ9UGC7 380 aaKnown RBP10.83□□□□□ -0.68
CASP4-203ENST00000444739 ARMCX3Q9UH62 379 aaPredicted RBP10.83□□□□□ -0.68
CASP4-203ENST00000444739 RTCBQ9Y3I0 505 aaKnown RBP10.83□□□□□ -0.68
CASP4-203ENST00000444739 NPHP3-ACAD11A0A0J9YXS1 232 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 TMEM120BA0PK00 339 aa10.83□□□□□ -0.68
CASP4-203ENST00000444739 EIF4E1BA6NMX2 242 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms