RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 FMNL3Q8IVF7 1028 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 GTF3C2Q8WUA4 911 aaPredicted RBP17.16■□□□□ 0.34
SNX13-204ENST00000444712 ANKRD7Q92527 254 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 CLMNQ96JQ2 1002 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 NAPGQ99747 312 aaPredicted RBP17.16■□□□□ 0.34
SNX13-204ENST00000444712 GANQ9H2C0 597 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 ARHGAP20Q9P2F6 1191 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 IGSF9BQ9UPX0 1349 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 H0YCG3 227 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 MAPK13O15264 365 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 AKR1B10O60218 316 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 SUPT20HL2P0C7V6 817 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 SCP2P22307 547 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 EDNRBP24530 442 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 RTP1P59025 263 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 NCBP1Q09161 790 aaKnown RBP17.16■□□□□ 0.34
SNX13-204ENST00000444712 KIF5AQ12840 1032 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 DMP1Q13316 513 aaPredicted RBP17.16■□□□□ 0.34
SNX13-204ENST00000444712 ANO5Q75V66 913 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 HAUS6Q7Z4H7 955 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 OPTNQ96CV9 577 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 CEP170P1Q96L14 293 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 CRACR2AQ9BSW2 395 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 NLRC4Q9NPP4 1024 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 AIPL1Q9NZN9 384 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 FANCGO15287 622 aa17.15■□□□□ 0.34
SNX13-204ENST00000444712 EXOC3O60645 756 aa17.15■□□□□ 0.34
SNX13-204ENST00000444712 KRT13P13646 458 aa17.15■□□□□ 0.34
SNX13-204ENST00000444712 EIF4A3P38919 411 aaKnown RBP17.15■□□□□ 0.34
SNX13-204ENST00000444712 XKR3Q5GH77 459 aa17.15■□□□□ 0.34
SNX13-204ENST00000444712 FAM102BQ5T8I3 360 aa17.15■□□□□ 0.34
SNX13-204ENST00000444712 SWSAP1Q6NVH7 229 aa17.15■□□□□ 0.34
SNX13-204ENST00000444712 SLC35F6Q8N357 371 aa17.15■□□□□ 0.34
SNX13-204ENST00000444712 SPIRE2Q8WWL2 714 aa17.15■□□□□ 0.34
SNX13-204ENST00000444712 PAGR1Q9BTK6 254 aa17.15■□□□□ 0.34
SNX13-204ENST00000444712 TAF1DQ9H5J8 278 aaPredicted RBP17.15■□□□□ 0.34
SNX13-204ENST00000444712 GUCA1BQ9UMX6 200 aa17.15■□□□□ 0.34
SNX13-204ENST00000444712 BZW2Q9Y6E2 419 aaKnown RBP17.15■□□□□ 0.34
SNX13-204ENST00000444712 LOC102724159A0A0B4J2E5 919 aa17.14■□□□□ 0.34
SNX13-204ENST00000444712 GRIN3BO60391 1043 aa17.14■□□□□ 0.34
SNX13-204ENST00000444712 TGFB3P10600 412 aa17.14■□□□□ 0.34
SNX13-204ENST00000444712 CYP2J2P51589 502 aa17.14■□□□□ 0.34
SNX13-204ENST00000444712 PEX3P56589 373 aa17.14■□□□□ 0.34
SNX13-204ENST00000444712 NEDD9Q14511 834 aa17.14■□□□□ 0.34
SNX13-204ENST00000444712 PWP2Q15269 919 aaKnown RBP17.14■□□□□ 0.34
SNX13-204ENST00000444712 TDRD12Q587J7 1177 aaKnown RBP17.14■□□□□ 0.34
SNX13-204ENST00000444712 PLA2G4FQ68DD2 849 aa17.14■□□□□ 0.34
SNX13-204ENST00000444712 INTS8Q75QN2 995 aaKnown RBP17.14■□□□□ 0.34
SNX13-204ENST00000444712 IFIH1Q9BYX4 1025 aaKnown RBP17.14■□□□□ 0.34
SNX13-204ENST00000444712 IRX2Q9BZI1 471 aaPredicted RBP17.14■□□□□ 0.34
SNX13-204ENST00000444712 PNMA3Q9UL41 463 aa17.14■□□□□ 0.34
SNX13-204ENST00000444712 EFCAB8A8MWE9 144 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 N4BP1O75113 896 aaKnown RBP17.14■□□□□ 0.33
SNX13-204ENST00000444712 ATG7O95352 703 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 PON1P27169 355 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 NPEPPSP55786 919 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 TUBB4BP68371 445 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 PRKCEQ02156 737 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 CNTN2Q02246 1040 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 ASIC2Q16515 512 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 EAPPQ56P03 285 aaPredicted RBP17.14■□□□□ 0.33
SNX13-204ENST00000444712 KLHDC7AQ5VTJ3 777 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 KCNV1Q6PIU1 500 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 KSR1Q8IVT5 923 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 FAM133AQ8N9E0 248 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 SPAG5Q96R06 1193 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 ATP6V0A4Q9HBG4 840 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 GCNT4Q9P109 453 aa17.14■□□□□ 0.33
SNX13-204ENST00000444712 SEPT9Q9UHD8 586 aaPredicted RBP17.14■□□□□ 0.33
SNX13-204ENST00000444712 A0A0U1RQJ8 604 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 ZNF862O60290 1169 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 UCHL3P15374 230 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 ANXA13P27216 316 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 BFSP1Q12934 665 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 SNAPC2Q13487 334 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 RAPGEF1Q13905 1077 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 GPR162Q16538 588 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 CCDC60Q8IWA6 550 aaPredicted RBP17.13■□□□□ 0.33
SNX13-204ENST00000444712 ATRIPQ8WXE1 791 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 TSC1Q92574 1164 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 NTPCRQ9BSD7 190 aaKnown RBP17.13■□□□□ 0.33
SNX13-204ENST00000444712 KMT5AQ9NQR1 393 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 CYP26B1Q9NR63 512 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 RBAK-RBAKDNI3L0D1 243 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 CNMDO75829 334 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 STBD1O95210 358 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 RFX1P22670 979 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 FMO5P49326 533 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 CETN1Q12798 172 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 LDLRAD1Q5T700 205 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 HGSNATQ68CP4 663 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 CEP112Q8N8E3 955 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 XXYLT1Q8NBI6 393 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 IFT74Q96LB3 600 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 MROH8Q9H579 483 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 ZNF302Q9NR11 478 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 CDC23Q9UJX2 597 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 PCDHA13Q9Y5I0 950 aa17.13■□□□□ 0.33
SNX13-204ENST00000444712 ZNFX1Q9P2E3 1918 aaKnown RBP17.12■□□□□ 0.33
SNX13-204ENST00000444712 TMEM150BA6NC51 233 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms