RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ALG13Q9NP73 1137 aaKnown RBP12.21□□□□□ -0.45
SF3A1-203ENST00000444440 BMP2KQ9NSY1 1161 aaPredicted RBP12.21□□□□□ -0.45
SF3A1-203ENST00000444440 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.45
SF3A1-203ENST00000444440 BDP1A6H8Y1 2624 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 A0A087WWV3 80 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 A0A087WZ62 844 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 DENND3A2RUS2 1198 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 TBX3O15119 743 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 GPR182O15218 404 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 MAFO75444 373 aaPredicted RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 CD2BP2O95400 341 aaKnown RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 ITGB1P05556 798 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 P4HBP07237 508 aaKnown RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 DARSP14868 501 aaKnown RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 ATF7P17544 494 aaPredicted RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 EIF4BP23588 611 aaKnown RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 GTF2F1P35269 517 aaKnown RBP eCLIP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 QARSP47897 775 aaKnown RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 FAM189BP81408 668 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 CYP4A11Q02928 519 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 CTTNQ14247 550 aaKnown RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 EPHA7Q15375 998 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 SLC24A5Q71RS6 500 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 SYMPKQ92797 1274 aaKnown RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 FDXACB1Q9BRP7 624 aaPredicted RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 LXNQ9BS40 222 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 UBE2ZQ9H832 354 aaPredicted RBP12.2□□□□□ -0.46
SF3A1-203ENST00000444440 CYP26B1Q9NR63 512 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 LRFN2Q9ULH4 789 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 COG5Q9UP83 839 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 PCDHGC5Q9Y5F6 944 aa12.2□□□□□ -0.46
SF3A1-203ENST00000444440 TBKBP1A7MCY6 615 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 STAG3L1P0CL83 205 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 TMOD1P28289 359 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 IRS1P35568 1242 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 RBM25P49756 843 aaKnown RBP12.19□□□□□ -0.46
SF3A1-203ENST00000444440 LRRC55Q6ZSA7 311 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 RHPN2Q8IUC4 686 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 KLHL23Q8NBE8 558 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 NLRP7Q8WX94 980 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 MTMR9Q96QG7 549 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 UHRF1Q96T88 793 aaPredicted RBP12.19□□□□□ -0.46
SF3A1-203ENST00000444440 C11orf84Q9BUA3 381 aaPredicted RBP12.19□□□□□ -0.46
SF3A1-203ENST00000444440 DHX33Q9H6R0 707 aaKnown RBP12.19□□□□□ -0.46
SF3A1-203ENST00000444440 CWH43Q9H720 699 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 BRMS1Q9HCU9 246 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 C1orf112Q9NSG2 853 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 SUCLA2Q9P2R7 463 aaPredicted RBP12.19□□□□□ -0.46
SF3A1-203ENST00000444440 PLAGL2Q9UPG8 496 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 PCDHB7Q9Y5E2 793 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 MYH15Q9Y2K3 1946 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 TRIOO75962 3097 aa12.19□□□□□ -0.46
SF3A1-203ENST00000444440 POTEMA6NI47 508 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 SLITRK3O94933 977 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 RB1P06400 928 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 ATP2B1P20020 1258 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 YWHABP31946 246 aaKnown RBP12.18□□□□□ -0.46
SF3A1-203ENST00000444440 LTBRP36941 435 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 HYAL1Q12794 435 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 COL19A1Q14993 1142 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 CALCRLQ16602 461 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 TIGD5Q53EQ6 642 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 CLLU1OSQ5K130 101 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 ADGRD2Q7Z7M1 963 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 ZNF598Q86UK7 904 aaKnown RBP12.18□□□□□ -0.46
SF3A1-203ENST00000444440 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 C4orf19Q8IY42 314 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.18□□□□□ -0.46
SF3A1-203ENST00000444440 SPPL3Q8TCT6 385 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 TMEM143Q96AN5 459 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 CEP170P1Q96L14 293 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 SCLT1Q96NL6 688 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 CASD1Q96PB1 797 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
SF3A1-203ENST00000444440 EIF2AK1Q9BQI3 630 aaKnown RBP12.18□□□□□ -0.46
SF3A1-203ENST00000444440 NSUN3Q9H649 340 aaKnown RBP12.18□□□□□ -0.46
SF3A1-203ENST00000444440 MINDY3Q9H8M7 445 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 IFT122Q9HBG6 1241 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 XPNPEP1Q9NQW7 623 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 TYW1Q9NV66 732 aaKnown RBP12.18□□□□□ -0.46
SF3A1-203ENST00000444440 TMEM161AQ9NX61 479 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 PLXNA3P51805 1871 aa12.18□□□□□ -0.46
SF3A1-203ENST00000444440 MEIS3P2A8K0S8 358 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 H3BQ06 376 aaPredicted RBP12.17□□□□□ -0.46
SF3A1-203ENST00000444440 TNFRSF10AO00220 468 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 LINC01565O15544 149 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 NEMFO60524 1076 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 IL9P15248 144 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 KCNA5P22460 613 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 MCM7P33993 719 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 PBX3P40426 434 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 TXKP42681 527 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 DLX2Q07687 328 aaPredicted RBP12.17□□□□□ -0.46
SF3A1-203ENST00000444440 TRIM29Q14134 588 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 NBR1Q14596 966 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 PTPROQ16827 1216 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 ODR4Q5SWX8 454 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 SLFN12Q8IYM2 578 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 NEK9Q8TD19 979 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms