RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 KLHL10Q6JEL2 608 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 CCDC62Q6P9F0 684 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 NSMFQ6X4W1 530 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 ZPBP2Q6X784 338 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 GBP6Q6ZN66 633 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 DYMQ7RTS9 669 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 VPS36Q86VN1 386 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 NT5DC4Q86YG4 428 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 TPH2Q8IWU9 490 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 GRAMD1CQ8IYS0 662 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 CPXCR1Q8N123 301 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 TTC39CQ8N584 583 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 MYCT1Q8N699 235 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 CCDC155Q8N6L0 562 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 XXYLT1Q8NBI6 393 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 NEK11Q8NG66 645 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 TMC2Q8TDI7 906 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 LRRC15Q8TF66 581 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 SLC7A3Q8WY07 619 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 RUBCNQ92622 972 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 STAMQ92783 540 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 ERCC4Q92889 916 aaPredicted RBP3.1□□□□□ -1.91
LINC00393-201ENST00000443621 OPTNQ96CV9 577 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 BORCS6Q96GS4 357 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 DYDC2Q96IM9 177 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 WNK4Q96J92 1243 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 IFT74Q96LB3 600 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 CCDC43Q96MW1 224 aaKnown RBP3.1□□□□□ -1.91
LINC00393-201ENST00000443621 ACCSQ96QU6 501 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 MAP7D2Q96T17 732 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 PORCNQ9H237 461 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 SMARCAD1Q9H4L7 1026 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 L2HGDHQ9H9P8 463 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 GBA2Q9HCG7 927 aaPredicted RBP3.1□□□□□ -1.91
LINC00393-201ENST00000443621 CYP26B1Q9NR63 512 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 BTBD7Q9P203 1132 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 ARHGAP28Q9P2N2 729 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 RBPJLQ9UBG7 517 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 RNF14Q9UBS8 474 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 LCMT1Q9UIC8 334 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 TSKSQ9UJT2 592 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 DDX41Q9UJV9 622 aaKnown RBP3.1□□□□□ -1.91
LINC00393-201ENST00000443621 CTNND2Q9UQB3 1225 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 SIK3Q9Y2K2 1263 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 FRMD4BQ9Y2L6 1034 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 GDAQ9Y2T3 454 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 SAMM50Q9Y512 469 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 EPN1Q9Y6I3 576 aaPredicted RBP3.1□□□□□ -1.91
LINC00393-201ENST00000443621 IVNS1ABPQ9Y6Y0 642 aa3.1□□□□□ -1.91
LINC00393-201ENST00000443621 CASP8AP2Q9UKL3 1982 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 A0A0A6YYK5 440 aaPredicted RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 TTC26A0AVF1 554 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 SOWAHBA6NEL2 793 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 RRN3P2A6NIE6 340 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 CES2O00748 559 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 TEX33O43247 280 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 CTIFO43310 598 aaKnown RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 KIF5CO60282 957 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 USO1O60763 962 aaKnown RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 ATP9AO75110 1047 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 HIP1RO75146 1068 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 ECM2O94769 699 aaPredicted RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 FARP2O94887 1054 aaPredicted RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 CLSTN1O94985 981 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 NDUFA10O95299 355 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 GCNT3O95395 438 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 ITGBL1O95965 494 aaPredicted RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 CCNE2O96020 404 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 NR3C1P04150 777 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 OATP04181 439 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 SERPING1P05155 500 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 FAM163BP0C2L3 166 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 MYCLP12524 364 aaPredicted RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 GZMAP12544 262 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 KRT13P13646 458 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 FERP16591 822 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 ERCC3P19447 782 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 EIF2AK2P19525 551 aaKnown RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 CASP1P29466 404 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 CNGA1P29973 690 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 CASP14P31944 242 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 HOXD13P35453 343 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 ARL2P36404 184 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 FXR1P51114 621 aaKnown RBP eCLIP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 STAT5BP51692 787 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 PMS1P54277 932 aaKnown RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 HADHBP55084 474 aaKnown RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 BPIFB4P59827 614 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 PSMC6P62333 389 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 GCNT1Q02742 428 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 RBL2Q08999 1139 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 KCNMA1Q12791 1236 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 KCNH2Q12809 1159 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 BFSP1Q12934 665 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 TFDP1Q14186 410 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 BMS1Q14692 1282 aaKnown RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 SPA17Q15506 151 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 ZYXQ15942 572 aaKnown RBP3.09□□□□□ -1.91
LINC00393-201ENST00000443621 EXOC3L4Q17RC7 722 aa3.09□□□□□ -1.91
LINC00393-201ENST00000443621 ASTE1Q2TB18 679 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms