RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 USP28Q96RU2 1077 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 GCOM2Q9BZD3 368 aaPredicted RBP16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 ERVK-5Q9HDB9 667 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 XPNPEP1Q9NQW7 623 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 DDX19AQ9NUU7 478 aaKnown RBP16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 MSRAQ9UJ68 235 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 KIAA1024Q9UPX6 916 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 NOC2LQ9Y3T9 749 aaKnown RBP16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 PCDHA11Q9Y5I1 949 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 SRPRBQ9Y5M8 271 aaKnown RBP16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 COL4A3BPQ9Y5P4 624 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 PP2D1A8MPX8 630 aa16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 EYA4O95677 639 aa16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 DARSP14868 501 aaKnown RBP16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 POU5F1BQ06416 359 aa16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 SLC39A14Q15043 492 aa16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 HERC6Q8IVU3 1022 aa16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 NLRP7Q8WX94 980 aa16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 SCLT1Q96NL6 688 aa16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 PBX4Q9BYU1 374 aa16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 ST3GAL5Q9UNP4 418 aa16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 DNM3Q9UQ16 869 aa16.73■□□□□ 0.27
CSNK1E-210ENST00000442216 TCHHQ07283 1943 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 ARHGEF35A5YM69 484 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 GRXCR1A8MXD5 290 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 ENPP3O14638 875 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 DNAJB2P25686 324 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 CDC25AP30304 524 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 ARL2P36404 184 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 UBA7P41226 1012 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 DEFB103AP81534 67 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 PADI6Q6TGC4 694 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 FAM228AQ86W67 206 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 PRPF31Q8WWY3 499 aaKnown RBP16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 TOP1MTQ969P6 601 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 TMEM143Q96AN5 459 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 PPP1R16BQ96T49 567 aa16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 TSPYL2Q9H2G4 693 aaPredicted RBP16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
CSNK1E-210ENST00000442216 A0A087WWV3 80 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 A0A087WZ62 844 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 USO1O60763 962 aaKnown RBP16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 GJB5O95377 273 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 YEATS4O95619 227 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 BRD1O95696 1058 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 CYP11B2P19099 503 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 LAMTOR4Q0VGL1 99 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 NFX1Q12986 1120 aaKnown RBP16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 PKP1Q13835 747 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 TFDP1Q14186 410 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 PCBP1Q15365 356 aaKnown RBP eCLIP16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 SRGAP1Q7Z6B7 1085 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 CABP7Q86V35 215 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 LINC00301Q8NCQ3 95 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 TIFAQ96CG3 184 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 CALML4Q96GE6 196 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 CDK5RAP3Q96JB5 506 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 FDXACB1Q9BRP7 624 aaPredicted RBP16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 CCSER1Q9C0I3 900 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 BHMT2Q9H2M3 363 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 IFT122Q9HBG6 1241 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 C1orf112Q9NSG2 853 aa16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 FBXO2Q9UK22 296 aaPredicted RBP16.71■□□□□ 0.27
CSNK1E-210ENST00000442216 COL4A6Q14031 1691 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 PPP6R2O75170 966 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 SFPQP23246 707 aaKnown RBP eCLIP16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 MARCKSP29966 332 aaPredicted RBP16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 CEBPZQ03701 1054 aaKnown RBP16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 GRB10Q13322 594 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 STK38Q15208 465 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 TMEM119Q4V9L6 283 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 ZNF697Q5TEC3 545 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 IFNLR1Q8IU57 520 aaPredicted RBP16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 MYOCDQ8IZQ8 938 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 NLRP4Q96MN2 994 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 PNMA5Q96PV4 448 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 RAD9AQ99638 391 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 NFKBIZQ9BYH8 718 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 TMX1Q9H3N1 280 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 CHST12Q9NRB3 414 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 RGS18Q9NS28 235 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 BMP2KQ9NSY1 1161 aaPredicted RBP16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 INSL6Q9Y581 213 aa16.7■□□□□ 0.26
CSNK1E-210ENST00000442216 E9PMD0 336 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 SPTLC2O15270 562 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 TLL1O43897 1013 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 PBX2P40425 430 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 PHKA2P46019 1235 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 RABGGTBP53611 331 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 HTRA4P83105 476 aaPredicted RBP16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 GRIN1Q05586 938 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 DSC3Q14574 896 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 RTN4RL1Q86UN2 441 aaPredicted RBP16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 KSR1Q8IVT5 923 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 KRI1Q8N9T8 703 aaKnown RBP16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 RNF149Q8NC42 400 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 LINC01599Q8WXQ3 324 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 ZNF668Q96K58 619 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms