RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 PDXKO00764 312 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 TBC1D8O95759 1140 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 NPTX2P47972 431 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 NCKAP1LP55160 1127 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 CAP1Q01518 475 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 DMP1Q13316 513 aaPredicted RBP21.01■□□□□ 0.95
SNX17-203ENST00000440760 ADAM9Q13443 819 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 TARBP2Q15633 366 aaKnown RBP21.01■□□□□ 0.95
SNX17-203ENST00000440760 EDRF1Q3B7T1 1238 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 DUSP28Q4G0W2 176 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 MIIPQ5JXC2 388 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 CEP135Q66GS9 1140 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 SPECC1LQ69YQ0 1117 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 ZC3H3Q8IXZ2 948 aaKnown RBP21.01■□□□□ 0.95
SNX17-203ENST00000440760 MSL3Q8N5Y2 521 aaKnown RBP21.01■□□□□ 0.95
SNX17-203ENST00000440760 KIFAP3Q92845 792 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 DHX33Q9H6R0 707 aaKnown RBP21.01■□□□□ 0.95
SNX17-203ENST00000440760 NRBP2Q9NSY0 501 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 IMPACTQ9P2X3 320 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 ZKSCAN5Q9Y2L8 839 aa21.01■□□□□ 0.95
SNX17-203ENST00000440760 TISP43B9A030 160 aa21■□□□□ 0.95
SNX17-203ENST00000440760 CALUO43852 315 aaPredicted RBP21■□□□□ 0.95
SNX17-203ENST00000440760 FGFR1OPO95684 399 aaKnown RBP21■□□□□ 0.95
SNX17-203ENST00000440760 NR3C1P04150 777 aa21■□□□□ 0.95
SNX17-203ENST00000440760 LGALS2P05162 132 aa21■□□□□ 0.95
SNX17-203ENST00000440760 UBXN1Q04323 297 aa21■□□□□ 0.95
SNX17-203ENST00000440760 ARMCX5Q6P1M9 558 aa21■□□□□ 0.95
SNX17-203ENST00000440760 STXBP4Q6ZWJ1 553 aa21■□□□□ 0.95
SNX17-203ENST00000440760 HAUS6Q7Z4H7 955 aa21■□□□□ 0.95
SNX17-203ENST00000440760 ZSCAN30Q86W11 494 aa21■□□□□ 0.95
SNX17-203ENST00000440760 PPTC7Q8NI37 304 aa21■□□□□ 0.95
SNX17-203ENST00000440760 TRAPPC12Q8WVT3 735 aa21■□□□□ 0.95
SNX17-203ENST00000440760 NOC4LQ9BVI4 516 aaKnown RBP21■□□□□ 0.95
SNX17-203ENST00000440760 TRPC6Q9Y210 931 aa21■□□□□ 0.95
SNX17-203ENST00000440760 PCDHB13Q9Y5F0 798 aa21■□□□□ 0.95
SNX17-203ENST00000440760 ALDH1A1P00352 501 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 PSMC4P43686 418 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 LACTBP83111 547 aaPredicted RBP20.99■□□□□ 0.95
SNX17-203ENST00000440760 CCDC40Q4G0X9 1142 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 PLPPR4Q7Z2D5 763 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 OR6J1Q8NGC5 347 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 ATP8B4Q8TF62 1192 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 SLC7A3Q8WY07 619 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 EMID1Q96A84 441 aaPredicted RBP20.99■□□□□ 0.95
SNX17-203ENST00000440760 FAM167AQ96KS9 214 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 CEP63Q96MT8 703 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 ESPNB1AK53 854 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 ZBTB42B2RXF5 422 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 MAPTP10636 758 aaKnown RBP20.99■□□□□ 0.95
SNX17-203ENST00000440760 DRP2Q13474 957 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 ASAP3Q8TDY4 903 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 BBXQ8WY36 941 aaPredicted RBP20.99■□□□□ 0.95
SNX17-203ENST00000440760 ZBTB10Q96DT7 871 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 SMARCAD1Q9H4L7 1026 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 KMT5AQ9NQR1 393 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 GABRQQ9UN88 632 aa20.99■□□□□ 0.95
SNX17-203ENST00000440760 ZNF865P0CJ78 1059 aaPredicted RBP20.98■□□□□ 0.95
SNX17-203ENST00000440760 CASP4P49662 377 aa20.98■□□□□ 0.95
SNX17-203ENST00000440760 FCGRTP55899 365 aa20.98■□□□□ 0.95
SNX17-203ENST00000440760 TNFAIP2Q03169 654 aa20.98■□□□□ 0.95
SNX17-203ENST00000440760 OLFML2BQ68BL8 750 aa20.98■□□□□ 0.95
SNX17-203ENST00000440760 SYCP3Q8IZU3 236 aa20.98■□□□□ 0.95
SNX17-203ENST00000440760 TMEM161BQ8NDZ6 487 aa20.98■□□□□ 0.95
SNX17-203ENST00000440760 GBP3Q9H0R5 595 aa20.98■□□□□ 0.95
SNX17-203ENST00000440760 AGPAT3Q9NRZ7 376 aa20.98■□□□□ 0.95
SNX17-203ENST00000440760 PYCARDQ9ULZ3 195 aa20.98■□□□□ 0.95
SNX17-203ENST00000440760 CETN3O15182 167 aa20.97■□□□□ 0.95
SNX17-203ENST00000440760 IRX5P78411 483 aaPredicted RBP20.97■□□□□ 0.95
SNX17-203ENST00000440760 TBX2Q13207 712 aaPredicted RBP20.97■□□□□ 0.95
SNX17-203ENST00000440760 LRRC8AQ8IWT6 810 aa20.97■□□□□ 0.95
SNX17-203ENST00000440760 RNPEPQ9H4A4 650 aa20.97■□□□□ 0.95
SNX17-203ENST00000440760 AKAP3O75969 853 aa20.97■□□□□ 0.95
SNX17-203ENST00000440760 MMP3P08254 477 aa20.97■□□□□ 0.95
SNX17-203ENST00000440760 RFC5P40937 340 aa20.97■□□□□ 0.95
SNX17-203ENST00000440760 GSDMDP57764 484 aa20.97■□□□□ 0.95
SNX17-203ENST00000440760 GTF2BQ00403 316 aa20.97■□□□□ 0.95
SNX17-203ENST00000440760 TBC1D8BQ0IIM8 1120 aa20.97■□□□□ 0.95
SNX17-203ENST00000440760 MAN2A1Q16706 1144 aa20.97■□□□□ 0.95
SNX17-203ENST00000440760 IQSEC1Q6DN90 963 aa20.97■□□□□ 0.95
SNX17-203ENST00000440760 DENND3A2RUS2 1198 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 GLRA2P23416 452 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 KLK7P49862 253 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 CYP2J2P51589 502 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 SMTNP53814 917 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 ALCAMQ13740 583 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 HS2ST1Q7LGA3 356 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 LRRC71Q8N4P6 559 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 ACCSQ96QU6 501 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 ST6GALNAC4Q9H4F1 302 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 ERAP1Q9NZ08 941 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 MAFO75444 373 aaPredicted RBP20.96■□□□□ 0.95
SNX17-203ENST00000440760 TPM2P07951 284 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 VWA3BQ502W6 1294 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 SPIRE2Q8WWL2 714 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 IFT74Q96LB3 600 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 C16orf70Q9BSU1 422 aa20.96■□□□□ 0.95
SNX17-203ENST00000440760 SIP14410 1827 aa20.95■□□□□ 0.94
SNX17-203ENST00000440760 HTTP42858 3142 aa20.95■□□□□ 0.94
SNX17-203ENST00000440760 EVPLQ92817 2033 aa20.95■□□□□ 0.94
SNX17-203ENST00000440760 DYNC1LI2O43237 492 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms