RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 KLC2Q9H0B6 622 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 TMPRSS5Q9H3S3 457 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 PANK3Q9H999 370 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 INCENPQ9NQS7 918 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 NDOR1Q9UHB4 597 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 PCDHA8Q9Y5H6 950 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 SMG6Q86US8 1419 aaKnown RBP4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 E9PCH4 1651 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 TET3O43151 1660 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 SCAF11Q99590 1463 aaKnown RBP4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 MLH3Q9UHC1 1453 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 PARD3Q8TEW0 1356 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 DEPDC5O75140 1603 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 FAM221BA6H8Z2 402 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 MAN2B1O00754 1011 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 DIAPH1O60610 1272 aaKnown RBP4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 CRTAMO95727 393 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 HMGCRP04035 888 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 SRGAP2CP0DJJ0 459 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 AOAHP28039 575 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 CSF2RBP32927 897 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 IRX6P78412 446 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 LIMS2Q7Z4I7 341 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 PTRH1Q86Y79 214 aaKnown RBP4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 RBM12BQ8IXT5 1001 aaKnown RBP4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 BTBD2Q9BX70 525 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 CELF4Q9BZC1 486 aaKnown RBP4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 RBPJLQ9UBG7 517 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 NUDCQ9Y266 331 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 KNSTRNQ9Y448 316 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 NEURL4Q96JN8 1562 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 RPGRIP1LQ68CZ1 1315 aa4.44□□□□□ -1.7
HMGB3P11-201ENST00000440127 NEO1Q92859 1461 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 LRPPRCP42704 1394 aaKnown RBP4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 EIF3AQ14152 1382 aaKnown RBP4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 LMTK2Q8IWU2 1503 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 PATE3B3GLJ2 98 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 ZNF561-AS1K7EIQ3 104 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 ACOT7O00154 380 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 ZNF623O75123 536 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 C6orf222P0C671 652 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 FAM153BP0C7A2 387 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 PYGMP11217 842 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 MEOX1P50221 254 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 LACTBP83111 547 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 PTPROQ16827 1216 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 ARHGAP44Q17R89 818 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 PLEKHG4Q58EX7 1191 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 TRIM61Q5EBN2 209 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 CC2D1BQ5T0F9 858 aaKnown RBP4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 GGT6Q6P531 493 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 OTOP2Q7RTS6 562 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 DNERQ8NFT8 737 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 EXOC2Q96KP1 924 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 SSBP3Q9BWW4 388 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 SLC39A2Q9NP94 309 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 KCNH7Q9NS40 1196 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 GALNT8Q9NY28 637 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 ST6GALNAC2Q9UJ37 374 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 TELO2Q9Y4R8 837 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 POGZQ7Z3K3 1410 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 CFAP74Q9C0B2 1584 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 CLTCL1P53675 1640 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 MADDQ8WXG6 1647 aa4.43□□□□□ -1.7
HMGB3P11-201ENST00000440127 INSRP06213 1382 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 SLC12A8A0AV02 714 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 ESYT3A0FGR9 886 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 MAFGO15525 162 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 RAB11FIP3O75154 756 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 CNOT4O95628 575 aaKnown RBP4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 TNFRSF1AP19438 455 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 RPS19P39019 145 aaKnown RBP4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 GDF5P43026 501 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 SESN2P58004 480 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 KRTAP10-2P60368 255 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 TOP3AQ13472 1001 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 SPHKAPQ2M3C7 1700 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 C2orf27AQ580R0 203 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 DDX53Q86TM3 631 aaKnown RBP4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 OSTM1Q86WC4 334 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 RTKN2Q8IZC4 609 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 HIPK4Q8NE63 616 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 GSTCDQ8NEC7 633 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 SH3RF2Q8TEC5 729 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 NEIL1Q96FI4 390 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 FAM89AQ96GI7 184 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 LRRC37BQ96QE4 947 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 BRINP2Q9C0B6 783 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 MEGF9Q9H1U4 602 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 KANSL2Q9H9L4 492 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 WASF3Q9UPY6 502 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 NR2E1Q9Y466 385 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 TESMINQ9Y4I5 508 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 ASB1Q9Y576 335 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 PCDHA9Q9Y5H5 950 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 KIDINS220Q9ULH0 1771 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 MROH1Q8NDA8 1641 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 RNF17Q9BXT8 1623 aaKnown RBP4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 MYOM2P54296 1465 aa4.42□□□□□ -1.7
HMGB3P11-201ENST00000440127 ADGRF5Q8IZF2 1346 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms