RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ZNF214Q9UL59 606 aaPredicted RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 PLAGL2Q9UPG8 496 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 ASTN1O14525 1302 aa15.46■□□□□ 0.07
LIMD1-202ENST00000440097 TMEM150BA6NC51 233 aa15.46■□□□□ 0.07
LIMD1-202ENST00000440097 AKAP3O75969 853 aa15.46■□□□□ 0.07
LIMD1-202ENST00000440097 CASP4P49662 377 aa15.46■□□□□ 0.07
LIMD1-202ENST00000440097 APBA1Q02410 837 aa15.46■□□□□ 0.07
LIMD1-202ENST00000440097 B3GNT9Q6UX72 402 aa15.46■□□□□ 0.07
LIMD1-202ENST00000440097 MYCBPQ99417 103 aaPredicted RBP15.46■□□□□ 0.07
LIMD1-202ENST00000440097 HOXC10Q9NYD6 342 aa15.46■□□□□ 0.07
LIMD1-202ENST00000440097 POLR2AP24928 1970 aaKnown RBP15.46■□□□□ 0.06
LIMD1-202ENST00000440097 SRGAP2O75044 1071 aa15.46■□□□□ 0.06
LIMD1-202ENST00000440097 USP2O75604 605 aaPredicted RBP15.46■□□□□ 0.06
LIMD1-202ENST00000440097 KCNMA1Q12791 1236 aa15.46■□□□□ 0.06
LIMD1-202ENST00000440097 TTLL12Q14166 644 aaPredicted RBP15.46■□□□□ 0.06
LIMD1-202ENST00000440097 CATSPERGQ6ZRH7 1159 aa15.46■□□□□ 0.06
LIMD1-202ENST00000440097 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.46■□□□□ 0.06
LIMD1-202ENST00000440097 CCDC170Q8IYT3 715 aa15.46■□□□□ 0.06
LIMD1-202ENST00000440097 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.46■□□□□ 0.06
LIMD1-202ENST00000440097 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.06
LIMD1-202ENST00000440097 ADARB2Q9NS39 739 aaKnown RBP15.46■□□□□ 0.06
LIMD1-202ENST00000440097 KCND2Q9NZV8 630 aa15.46■□□□□ 0.06
LIMD1-202ENST00000440097 ODF2LQ9ULJ1 636 aa15.46■□□□□ 0.06
LIMD1-202ENST00000440097 AFG3L2Q9Y4W6 797 aa15.46■□□□□ 0.06
LIMD1-202ENST00000440097 K7ENM7 598 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 KRT86O43790 486 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 YWHABP31946 246 aaKnown RBP15.45■□□□□ 0.06
LIMD1-202ENST00000440097 CCT5P48643 541 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 CYP2J2P51589 502 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 GHRHRQ02643 423 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 GPR162Q16538 588 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 SAMD3Q8N6K7 520 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 NSUN6Q8TEA1 469 aaKnown RBP15.45■□□□□ 0.06
LIMD1-202ENST00000440097 JAKMIP2Q96AA8 810 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 CAPZA3Q96KX2 299 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 C12orf42Q96LP6 360 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 HAUS4Q9H6D7 363 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 ACAD9Q9H845 621 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 SEL1LQ9UBV2 794 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 WDR64B1ANS9 1081 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 SHOX2O60902 331 aaPredicted RBP15.45■□□□□ 0.06
LIMD1-202ENST00000440097 ATP1A1P05023 1023 aaKnown RBP15.45■□□□□ 0.06
LIMD1-202ENST00000440097 MCM3P25205 808 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 LIG3P49916 1009 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 HERVK_113P62684 666 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 ZNF720Q7Z2F6 126 aa15.45■□□□□ 0.06
LIMD1-202ENST00000440097 LARSQ9P2J5 1176 aaKnown RBP15.45■□□□□ 0.06
LIMD1-202ENST00000440097 MACROD2A1Z1Q3 448 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 RCCD1A6NED2 376 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 EIF3DO15371 548 aaKnown RBP eCLIP15.44■□□□□ 0.06
LIMD1-202ENST00000440097 PEX10O60683 326 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 ERLIN2O94905 339 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 AFPP02771 609 aaKnown RBP15.44■□□□□ 0.06
LIMD1-202ENST00000440097 EIF4A3P38919 411 aaKnown RBP15.44■□□□□ 0.06
LIMD1-202ENST00000440097 MARSP56192 900 aaKnown RBP15.44■□□□□ 0.06
LIMD1-202ENST00000440097 RAPGEF1Q13905 1077 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 GADL1Q6ZQY3 521 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 PAXIP1Q6ZW49 1069 aaPredicted RBP15.44■□□□□ 0.06
LIMD1-202ENST00000440097 FRMD5Q7Z6J6 570 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 KAT2BQ92831 832 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 ARHGAP20Q9P2F6 1191 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 SPDYE16A6NNV3 312 aaPredicted RBP15.44■□□□□ 0.06
LIMD1-202ENST00000440097 AGPSO00116 658 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 MYBL2P10244 700 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 OAZ1P54368 228 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 KIF5AQ12840 1032 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 UGCGQ16739 394 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 BMT2Q1RMZ1 405 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 XKR9Q5GH70 373 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 ANKRD35Q8N283 1001 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 GPATCH11Q8N954 259 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 RDH13Q8NBN7 331 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 FAM76AQ8TAV0 307 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 FAM107BQ9H098 131 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 A1CFQ9NQ94 594 aaKnown RBP15.44■□□□□ 0.06
LIMD1-202ENST00000440097 CEP72Q9P209 647 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 SSC5DA1L4H1 1573 aa15.44■□□□□ 0.06
LIMD1-202ENST00000440097 TGFB1I1O43294 461 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 RARRES1P49788 294 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 KIF11P52732 1056 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 KRT76Q01546 638 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 PLA2G4FQ68DD2 849 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 VSIG10LQ86VR7 867 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 REPS2Q8NFH8 660 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 RBM46Q8TBY0 533 aaKnown RBP15.43■□□□□ 0.06
LIMD1-202ENST00000440097 OTUD5Q96G74 571 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 IFIH1Q9BYX4 1025 aaKnown RBP15.43■□□□□ 0.06
LIMD1-202ENST00000440097 RABEP2Q9H5N1 569 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 METTL14Q9HCE5 456 aaKnown RBP15.43■□□□□ 0.06
LIMD1-202ENST00000440097 CYP39A1Q9NYL5 469 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 SAR1BQ9Y6B6 198 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 DUSP10Q9Y6W6 482 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 CCNE2O96020 404 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 IRAK1P51617 712 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 JAK3P52333 1124 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 TREML2Q5T2D2 321 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 SFMBT2Q5VUG0 894 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 PDXDC1Q6P996 788 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 FAM186BQ8IYM0 893 aa15.43■□□□□ 0.06
LIMD1-202ENST00000440097 BAP1Q92560 729 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms