RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 GDF6Q6KF10 455 aaPredicted RBP8.29□□□□□ -1.08
UBR3-205ENST00000439681 RUFY4Q6ZNE9 571 aa8.29□□□□□ -1.08
UBR3-205ENST00000439681 CCDC65Q8IXS2 484 aa8.29□□□□□ -1.08
UBR3-205ENST00000439681 EXOC8Q8IYI6 725 aa8.29□□□□□ -1.08
UBR3-205ENST00000439681 KIAA0319LQ8IZA0 1049 aa8.29□□□□□ -1.08
UBR3-205ENST00000439681 ASAP3Q8TDY4 903 aa8.29□□□□□ -1.08
UBR3-205ENST00000439681 PRPF31Q8WWY3 499 aaKnown RBP8.29□□□□□ -1.08
UBR3-205ENST00000439681 GLT1D1Q96MS3 346 aa8.29□□□□□ -1.08
UBR3-205ENST00000439681 FGFBP2Q9BYJ0 223 aa8.29□□□□□ -1.08
UBR3-205ENST00000439681 POLR3FQ9H1D9 316 aaPredicted RBP8.29□□□□□ -1.08
UBR3-205ENST00000439681 COL4A3BPQ9Y5P4 624 aa8.29□□□□□ -1.08
UBR3-205ENST00000439681 GAS2O43903 313 aaKnown RBP8.28□□□□□ -1.08
UBR3-205ENST00000439681 FAM13AO94988 1023 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 PLS3P13797 630 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 GAP43P17677 238 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 GLRA2P23416 452 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 CDK7P50613 346 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 CLCN3P51790 818 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 RTP1P59025 263 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 IER5Q5VY09 327 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 SFR1Q86XK3 245 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 MYCT1Q8N699 235 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 METTL13Q8N6R0 699 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 GLIS3Q8NEA6 775 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 KIFAP3Q92845 792 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 VTI1AQ96AJ9 217 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 DRC1Q96MC2 740 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 JPH2Q9BR39 696 aaPredicted RBP8.28□□□□□ -1.08
UBR3-205ENST00000439681 NTPCRQ9BSD7 190 aaKnown RBP8.28□□□□□ -1.08
UBR3-205ENST00000439681 ZHX3Q9H4I2 956 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 PARVGQ9HBI0 331 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 EXOC1Q9NV70 894 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 RMND1Q9NWS8 449 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 TBC1D7Q9P0N9 293 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 SUCLA2Q9P2R7 463 aaPredicted RBP8.28□□□□□ -1.08
UBR3-205ENST00000439681 GDAQ9Y2T3 454 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 SMIM35A0A1B0GVV1 85 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 TBCAO75347 108 aaKnown RBP8.28□□□□□ -1.08
UBR3-205ENST00000439681 GNAT1P11488 350 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 COL6A1P12109 1028 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 NPTX2P47972 431 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 NLRP12P59046 1061 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 ZNF445P59923 1031 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 PTPN11Q06124 597 aaPredicted RBP8.28□□□□□ -1.08
UBR3-205ENST00000439681 TYRO3Q06418 890 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 PSMD2Q13200 908 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 ODR4Q5SWX8 454 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 ZNF658Q5TYW1 1059 aaPredicted RBP8.28□□□□□ -1.08
UBR3-205ENST00000439681 SASS6Q6UVJ0 657 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 ZNF720Q7Z2F6 126 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 KSR1Q8IVT5 923 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 SMYD4Q8IYR2 804 aaPredicted RBP8.28□□□□□ -1.08
UBR3-205ENST00000439681 TRIML1Q8N9V2 468 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 RETREG2Q8NC44 543 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 KIAA0895Q8NCT3 520 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 DIS3LQ8TF46 1054 aaKnown RBP8.28□□□□□ -1.08
UBR3-205ENST00000439681 SPIRE2Q8WWL2 714 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 STRA6Q9BX79 667 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 C17orf75Q9HAS0 396 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 SLC39A2Q9NP94 309 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 STARD7Q9NQZ5 370 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 OLFML3Q9NRN5 406 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 SEL1LQ9UBV2 794 aa8.28□□□□□ -1.08
UBR3-205ENST00000439681 A0A0U1RQG5 324 aaPredicted RBP8.27□□□□□ -1.09
UBR3-205ENST00000439681 PPP1R3GB7ZBB8 358 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 ARVCFO00192 962 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 CYP2C9P11712 490 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 CD44P16070 742 aaKnown RBP8.27□□□□□ -1.09
UBR3-205ENST00000439681 NMT1P30419 496 aaKnown RBP8.27□□□□□ -1.09
UBR3-205ENST00000439681 CASP5P51878 434 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 PEX3P56589 373 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 LAMTOR4Q0VGL1 99 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 DPCR1Q3MIW9 517 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 FAM47CQ5HY64 1035 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 FAM26FQ5R3K3 315 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 EPM2AIP1Q7L775 607 aaPredicted RBP8.27□□□□□ -1.09
UBR3-205ENST00000439681 ANKLE1Q8NAG6 615 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 TCP11Q8WWU5 503 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 PSPC1Q8WXF1 523 aaKnown RBP8.27□□□□□ -1.09
UBR3-205ENST00000439681 WNT8BQ93098 351 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 TMEM106CQ9BVX2 250 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 SENP6Q9GZR1 1112 aaPredicted RBP8.27□□□□□ -1.09
UBR3-205ENST00000439681 LARSQ9P2J5 1176 aaKnown RBP8.27□□□□□ -1.09
UBR3-205ENST00000439681 MYBP10242 640 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 MAPTP10636 758 aaKnown RBP8.27□□□□□ -1.09
UBR3-205ENST00000439681 CAPN2P17655 700 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 TMOD1P28289 359 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 HOXD13P35453 343 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 DNM2P50570 870 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 NCKAP1LP55160 1127 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 CAPSQ13938 189 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 MXD4Q14582 209 aaPredicted RBP8.27□□□□□ -1.09
UBR3-205ENST00000439681 COBLL1Q53SF7 1204 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 LRSAM1Q6UWE0 723 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 SERINC5Q86VE9 423 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 ADSSL1Q8N142 457 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 TMEM161BQ8NDZ6 487 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 DNAJB3Q8WWF6 145 aa8.27□□□□□ -1.09
UBR3-205ENST00000439681 CCDC47Q96A33 483 aaKnown RBP8.27□□□□□ -1.09
UBR3-205ENST00000439681 KIFC3Q9BVG8 833 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms