RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 KLHL23Q8NBE8 558 aa21.09■□□□□ 0.97
CCDC78-204ENST00000439619 NEK9Q8TD19 979 aa21.09■□□□□ 0.97
CCDC78-204ENST00000439619 OXER1Q8TDS5 423 aa21.09■□□□□ 0.97
CCDC78-204ENST00000439619 GJB4Q9NTQ9 266 aa21.09■□□□□ 0.97
CCDC78-204ENST00000439619 XIRP2A4UGR9 3374 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 MAFO75444 373 aaPredicted RBP21.08■□□□□ 0.97
CCDC78-204ENST00000439619 GATMP50440 423 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 TTC3P53804 2025 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 UBE3AQ05086 875 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 DSC3Q14574 896 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 RALGAPA2Q2PPJ7 1873 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 FAM102BQ5T8I3 360 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 OTUD6AQ7L8S5 288 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 ZNF410Q86VK4 478 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 C1QTNF1Q9BXJ1 281 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 TMEM117Q9H0C3 514 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 CYP26B1Q9NR63 512 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 SUCLA2Q9P2R7 463 aaPredicted RBP21.08■□□□□ 0.97
CCDC78-204ENST00000439619 VAV3Q9UKW4 847 aa21.08■□□□□ 0.97
CCDC78-204ENST00000439619 H3BQ06 376 aaPredicted RBP21.07■□□□□ 0.96
CCDC78-204ENST00000439619 CSPG5O95196 566 aa21.07■□□□□ 0.96
CCDC78-204ENST00000439619 ITGB1P05556 798 aa21.07■□□□□ 0.96
CCDC78-204ENST00000439619 LAG3P18627 525 aa21.07■□□□□ 0.96
CCDC78-204ENST00000439619 EPHA7Q15375 998 aa21.07■□□□□ 0.96
CCDC78-204ENST00000439619 SAFBQ15424 915 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCDC78-204ENST00000439619 RHPN2Q8IUC4 686 aa21.07■□□□□ 0.96
CCDC78-204ENST00000439619 THNSL1Q8IYQ7 743 aa21.07■□□□□ 0.96
CCDC78-204ENST00000439619 NSUN7Q8NE18 718 aaKnown RBP21.07■□□□□ 0.96
CCDC78-204ENST00000439619 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.07■□□□□ 0.96
CCDC78-204ENST00000439619 SPPL3Q8TCT6 385 aa21.07■□□□□ 0.96
CCDC78-204ENST00000439619 MICAL1Q8TDZ2 1067 aa21.07■□□□□ 0.96
CCDC78-204ENST00000439619 ZNF668Q96K58 619 aaPredicted RBP21.07■□□□□ 0.96
CCDC78-204ENST00000439619 CHST12Q9NRB3 414 aa21.07■□□□□ 0.96
CCDC78-204ENST00000439619 REV3LO60673 3130 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 IGKV6-21A0A0C4DH24 114 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 EML1O00423 815 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 FGFR1P11362 822 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 FDPSP14324 419 aaKnown RBP21.06■□□□□ 0.96
CCDC78-204ENST00000439619 RFC5P40937 340 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 POLGP54098 1239 aaPredicted RBP21.06■□□□□ 0.96
CCDC78-204ENST00000439619 NR5A1Q13285 461 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 COL19A1Q14993 1142 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 NCAPH2Q6IBW4 605 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 ANO5Q75V66 913 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 POTEDQ86YR6 584 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 LRRC43Q8N309 656 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 RNF169Q8NCN4 708 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 POF1BQ8WVV4 589 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 RSPH1Q8WYR4 309 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 CEP170P1Q96L14 293 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 IGFLR1Q9H665 355 aa21.06■□□□□ 0.96
CCDC78-204ENST00000439619 TYW1Q9NV66 732 aaKnown RBP21.06■□□□□ 0.96
CCDC78-204ENST00000439619 PUF60Q9UHX1 559 aaKnown RBP21.06■□□□□ 0.96
CCDC78-204ENST00000439619 A0A0U1RQF3 1178 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 FSD2A1L4K1 749 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 TMEM150BA6NC51 233 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 GRXCR2A6NFK2 248 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 STBD1O95210 358 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 EOMESO95936 686 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 SKIP12755 728 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 HYAL1Q12794 435 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 ECHDC2Q86YB7 292 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 C4orf19Q8IY42 314 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 DIS3L2Q8IYB7 885 aaKnown RBP21.05■□□□□ 0.96
CCDC78-204ENST00000439619 HAS1Q92839 578 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 SH2D3AQ9BRG2 576 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 LXNQ9BS40 222 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 ZSWIM4Q9H7M6 989 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 PCDHA12Q9UN75 941 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 LIMCH1Q9UPQ0 1083 aa21.05■□□□□ 0.96
CCDC78-204ENST00000439619 A0A087WZ62 844 aa21.04■□□□□ 0.96
CCDC78-204ENST00000439619 GAS2O43903 313 aaKnown RBP21.04■□□□□ 0.96
CCDC78-204ENST00000439619 DTNBO60941 627 aa21.04■□□□□ 0.96
CCDC78-204ENST00000439619 LARGE1O95461 756 aa21.04■□□□□ 0.96
CCDC78-204ENST00000439619 YWHABP31946 246 aaKnown RBP21.04■□□□□ 0.96
CCDC78-204ENST00000439619 SSTR3P32745 418 aaPredicted RBP21.04■□□□□ 0.96
CCDC78-204ENST00000439619 PPM1AP35813 382 aa21.04■□□□□ 0.96
CCDC78-204ENST00000439619 DRP2Q13474 957 aa21.04■□□□□ 0.96
CCDC78-204ENST00000439619 CALCRLQ16602 461 aa21.04■□□□□ 0.96
CCDC78-204ENST00000439619 PLA2G4FQ68DD2 849 aa21.04■□□□□ 0.96
CCDC78-204ENST00000439619 PDE12Q6L8Q7 609 aaKnown RBP21.04■□□□□ 0.96
CCDC78-204ENST00000439619 TCP11Q8WWU5 503 aa21.04■□□□□ 0.96
CCDC78-204ENST00000439619 NLRP4Q96MN2 994 aa21.04■□□□□ 0.96
CCDC78-204ENST00000439619 CEP89Q96ST8 783 aa21.04■□□□□ 0.96
CCDC78-204ENST00000439619 FDXACB1Q9BRP7 624 aaPredicted RBP21.04■□□□□ 0.96
CCDC78-204ENST00000439619 MRPL9Q9BYD2 267 aaKnown RBP21.04■□□□□ 0.96
CCDC78-204ENST00000439619 MYH9P35579 1960 aaKnown RBP21.03■□□□□ 0.96
CCDC78-204ENST00000439619 FGF18O76093 207 aa21.03■□□□□ 0.96
CCDC78-204ENST00000439619 NDUFV1P49821 464 aa21.03■□□□□ 0.96
CCDC78-204ENST00000439619 KRT17Q04695 432 aa21.03■□□□□ 0.96
CCDC78-204ENST00000439619 CTC1Q2NKJ3 1217 aa21.03■□□□□ 0.96
CCDC78-204ENST00000439619 TWF2Q6IBS0 349 aaKnown RBP21.03■□□□□ 0.96
CCDC78-204ENST00000439619 CATSPER4Q7RTX7 472 aa21.03■□□□□ 0.96
CCDC78-204ENST00000439619 FAM178BQ8IXR5 827 aa21.03■□□□□ 0.96
CCDC78-204ENST00000439619 COLGALT1Q8NBJ5 622 aa21.03■□□□□ 0.96
CCDC78-204ENST00000439619 PSPC1Q8WXF1 523 aaKnown RBP21.03■□□□□ 0.96
CCDC78-204ENST00000439619 CCDC43Q96MW1 224 aaKnown RBP21.03■□□□□ 0.96
CCDC78-204ENST00000439619 TLR9Q9NR96 1032 aa21.03■□□□□ 0.96
CCDC78-204ENST00000439619 COL4A3BPQ9Y5P4 624 aa21.03■□□□□ 0.96
CCDC78-204ENST00000439619 NLRC5Q86WI3 1866 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms