RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 PSMC5P62195 406 aa22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 ANO5Q75V66 913 aa22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 KLHL23Q8NBE8 558 aa22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 NSUN7Q8NE18 718 aaKnown RBP22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 TNFRSF25Q93038 417 aa22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 ZNF668Q96K58 619 aaPredicted RBP22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 NAP1L4Q99733 375 aaKnown RBP22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 KIAA1671Q9BY89 1806 aa22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 FAM205CA6NFA0 338 aa22.81■■□□□ 1.24
NCKIPSD-206ENST00000439518 DDX11L8A8MPP1 907 aa22.81■■□□□ 1.24
NCKIPSD-206ENST00000439518 NCK2O43639 380 aa22.81■■□□□ 1.24
NCKIPSD-206ENST00000439518 HYAL1Q12794 435 aa22.81■■□□□ 1.24
NCKIPSD-206ENST00000439518 NR5A1Q13285 461 aa22.81■■□□□ 1.24
NCKIPSD-206ENST00000439518 CTC1Q2NKJ3 1217 aa22.81■■□□□ 1.24
NCKIPSD-206ENST00000439518 SH2D3AQ9BRG2 576 aa22.81■■□□□ 1.24
NCKIPSD-206ENST00000439518 ATP6V0A4Q9HBG4 840 aa22.81■■□□□ 1.24
NCKIPSD-206ENST00000439518 FNDC1Q4ZHG4 1894 aaPredicted RBP22.8■■□□□ 1.24
NCKIPSD-206ENST00000439518 TBKBP1A7MCY6 615 aa22.8■■□□□ 1.24
NCKIPSD-206ENST00000439518 H3BQ06 376 aaPredicted RBP22.8■■□□□ 1.24
NCKIPSD-206ENST00000439518 MAFO75444 373 aaPredicted RBP22.8■■□□□ 1.24
NCKIPSD-206ENST00000439518 FGFR1P11362 822 aa22.8■■□□□ 1.24
NCKIPSD-206ENST00000439518 KRT2P35908 639 aa22.8■■□□□ 1.24
NCKIPSD-206ENST00000439518 QARSP47897 775 aaKnown RBP22.8■■□□□ 1.24
NCKIPSD-206ENST00000439518 CDC42EP1Q00587 391 aa22.8■■□□□ 1.24
NCKIPSD-206ENST00000439518 PTCRAQ6ISU1 281 aaPredicted RBP22.8■■□□□ 1.24
NCKIPSD-206ENST00000439518 NLRP7Q8WX94 980 aa22.8■■□□□ 1.24
NCKIPSD-206ENST00000439518 GRXCR2A6NFK2 248 aa22.79■■□□□ 1.24
NCKIPSD-206ENST00000439518 LTBRP36941 435 aa22.79■■□□□ 1.24
NCKIPSD-206ENST00000439518 PUS10Q3MIT2 529 aaKnown RBP22.79■■□□□ 1.24
NCKIPSD-206ENST00000439518 POTEDQ86YR6 584 aa22.79■■□□□ 1.24
NCKIPSD-206ENST00000439518 SCLT1Q96NL6 688 aa22.79■■□□□ 1.24
NCKIPSD-206ENST00000439518 RNF19AQ9NV58 838 aa22.79■■□□□ 1.24
NCKIPSD-206ENST00000439518 CLDND1Q9NY35 253 aa22.79■■□□□ 1.24
NCKIPSD-206ENST00000439518 WRAP73Q9P2S5 460 aaPredicted RBP22.79■■□□□ 1.24
NCKIPSD-206ENST00000439518 JAK2O60674 1132 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 ZSCAN20P17040 1043 aaPredicted RBP22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 FGFR4P22455 802 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 DNM2P50570 870 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 SPIRE1Q08AE8 756 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 PLA2G4FQ68DD2 849 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 ECHDC2Q86YB7 292 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 FAM178BQ8IXR5 827 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 POF1BQ8WVV4 589 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 GCOM2Q9BZD3 368 aaPredicted RBP22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 BRMS1Q9HCU9 246 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 CD320Q9NPF0 282 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 CYP26B1Q9NR63 512 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 TYW1Q9NV66 732 aaKnown RBP22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 HCSTQ9UBK5 93 aa22.78■■□□□ 1.24
NCKIPSD-206ENST00000439518 DKC1O60832 514 aaKnown RBP eCLIP22.77■■□□□ 1.241e-6■■□□□ 12.2
NCKIPSD-206ENST00000439518 CSDE1O75534 798 aaKnown RBP22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 P4HBP07237 508 aaKnown RBP22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 IL9P15248 144 aa22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 IRS1P35568 1242 aa22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 ST3GAL1Q11201 340 aa22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 EPHA7Q15375 998 aa22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 SLFN12Q8IYM2 578 aa22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 CASD1Q96PB1 797 aa22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 TMEM117Q9H0C3 514 aa22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 CWH43Q9H720 699 aa22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 AAASQ9NRG9 546 aa22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 SUCLA2Q9P2R7 463 aaPredicted RBP22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 PCDHB12Q9Y5F1 795 aa22.77■■□□□ 1.24
NCKIPSD-206ENST00000439518 A0A087WZ62 844 aa22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 A0A0U1RQF3 1178 aa22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 HOXA2O43364 376 aa22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 CSPG5O95196 566 aa22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 CENPBP07199 599 aaPredicted RBP22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 GTF2F1P35269 517 aaKnown RBP eCLIP22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 NPEPPSP55786 919 aa22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 EP400NLQ6ZTU2 488 aa22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 ZNF410Q86VK4 478 aa22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 ZNF579Q8NAF0 562 aaKnown RBP22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 JPH2Q9BR39 696 aaPredicted RBP22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 FDXACB1Q9BRP7 624 aaPredicted RBP22.76■■□□□ 1.23
NCKIPSD-206ENST00000439518 BTBD18B2RXH4 712 aa22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 MARCH6O60337 910 aa22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 UBE3AQ05086 875 aa22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 DLX2Q07687 328 aaPredicted RBP22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 ADAM15Q13444 863 aa22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 SPOUT1Q5T280 376 aaKnown RBP22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 LRRC55Q6ZSA7 311 aa22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 ZNF598Q86UK7 904 aaKnown RBP22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 RHPN2Q8IUC4 686 aa22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 C4orf19Q8IY42 314 aa22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 DIS3L2Q8IYB7 885 aaKnown RBP22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 COLGALT1Q8NBJ5 622 aa22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 CHST12Q9NRB3 414 aa22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 RGL1Q9NZL6 768 aa22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 PPME1Q9Y570 386 aa22.75■■□□□ 1.23
NCKIPSD-206ENST00000439518 FGF18O76093 207 aa22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 BAG4O95429 457 aaKnown RBP22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 ATF7P17544 494 aaPredicted RBP22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 CSPP1Q1MSJ5 1256 aa22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 NCAPH2Q6IBW4 605 aa22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 ADGRD2Q7Z7M1 963 aa22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 KSR1Q8IVT5 923 aa22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 KHSRPQ92945 711 aaKnown RBP eCLIP22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 PPP2R3CQ969Q6 453 aa22.74■■□□□ 1.23
NCKIPSD-206ENST00000439518 CEP170P1Q96L14 293 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms