RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PANK4Q9NVE7 773 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 GRIN2DO15399 1336 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 PHLPP2Q6ZVD8 1323 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 H0YCG3 227 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 ARVCFO00192 962 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 KLRC4O43908 158 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 PLS3P13797 630 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 IDEP14735 1019 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 ARL2P36404 184 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 PPP1R2P41236 205 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
SCLT1-202ENST00000439369 IGBP1P78318 339 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 POU5F1BQ06416 359 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 ALCAMQ13740 583 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 FAM102BQ5T8I3 360 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 EFCAB12Q6NXP0 572 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 RPAINQ86UA6 219 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 DAW1Q8N136 415 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 NME8Q8N427 588 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 TRAPPC12Q8WVT3 735 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 SPIRE2Q8WWL2 714 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 VTI1AQ96AJ9 217 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 IFT74Q96LB3 600 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 MAP7D2Q96T17 732 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 SH2D3AQ9BRG2 576 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 NTPCRQ9BSD7 190 aaKnown RBP14.04□□□□□ -0.16
SCLT1-202ENST00000439369 MROH7Q68CQ1 1323 aa14.04□□□□□ -0.16
SCLT1-202ENST00000439369 HTTP42858 3142 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 NPHP3-ACAD11A0A0J9YXS1 232 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 CAND2O75155 1236 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 KCNA4P22459 653 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 NAMPTP43490 491 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 CDK7P50613 346 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 CHMP4BP1P59074 171 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 COASYQ13057 564 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 SNX17Q15036 470 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 ZSCAN23Q3MJ62 389 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 KMT5BQ4FZB7 885 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 COBLL1Q53SF7 1204 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 FAM47CQ5HY64 1035 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 STXBP4Q6ZWJ1 553 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 SERINC5Q86VE9 423 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 POLR3FQ9H1D9 316 aaPredicted RBP14.03□□□□□ -0.16
SCLT1-202ENST00000439369 ST6GALNAC4Q9H4F1 302 aa14.03□□□□□ -0.16
SCLT1-202ENST00000439369 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-202ENST00000439369 KIF20AO95235 890 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 CYP2C9P11712 490 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 CASP1P29466 404 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 SMTNP53814 917 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 RAD51AP2Q09MP3 1159 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 PTK7Q13308 1070 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 DMP1Q13316 513 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-202ENST00000439369 MKRN4PQ13434 485 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-202ENST00000439369 MORC3Q14149 939 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 TFDP1Q14186 410 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 HERC4Q5GLZ8 1057 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-202ENST00000439369 CT47A1Q5JQC4 288 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-202ENST00000439369 FAM26FQ5R3K3 315 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 ODR4Q5SWX8 454 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 ZNF658Q5TYW1 1059 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-202ENST00000439369 GDF6Q6KF10 455 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-202ENST00000439369 SASS6Q6UVJ0 657 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 RSPH3Q86UC2 560 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 KIAA0319LQ8IZA0 1049 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 MYCT1Q8N699 235 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 METTL13Q8N6R0 699 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 HVCN1Q96D96 273 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 NFKBIZQ9BYH8 718 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 SUGCTQ9HAC7 445 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 SUCLA2Q9P2R7 463 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-202ENST00000439369 MAN1B1Q9UKM7 699 aa14.02□□□□□ -0.17
SCLT1-202ENST00000439369 UBE4BO95155 1302 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 RSPH10B2B2RC85 870 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 TREHO43280 583 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 RSPH10BP0C881 870 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 EFNA5P52803 228 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 NCKAP1LP55160 1127 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 LAMTOR4Q0VGL1 99 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 HIC1Q14526 733 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 PTGISQ16647 500 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 ANKRD33Q7Z3H0 272 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 NECAB2Q7Z6G3 386 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 ZNF410Q86VK4 478 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 SFR1Q86XK3 245 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 IFNLR1Q8IU57 520 aaPredicted RBP14.01□□□□□ -0.17
SCLT1-202ENST00000439369 FAM178BQ8IXR5 827 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 LRRC71Q8N4P6 559 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 MLKLQ8NB16 471 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 PRPF31Q8WWY3 499 aaKnown RBP14.01□□□□□ -0.17
SCLT1-202ENST00000439369 TMEM143Q96AN5 459 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 TOX2Q96NM4 488 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 C2orf40Q9H1Z8 148 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 ZHX3Q9H4I2 956 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 C11orf49Q9H6J7 331 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 GPRC5CQ9NQ84 441 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 ANO10Q9NW15 660 aa14.01□□□□□ -0.17
SCLT1-202ENST00000439369 EIF3DO15371 548 aaKnown RBP eCLIP14□□□□□ -0.17
SCLT1-202ENST00000439369 TLR3O15455 904 aaKnown RBP14□□□□□ -0.17
SCLT1-202ENST00000439369 CAVIN2O95810 425 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 CCDC192P0DO97 292 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms