RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 RPS6KA5O75582 802 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 FAM189BP81408 668 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 NONOQ15233 471 aaKnown RBP eCLIP12.81□□□□□ -0.36
CSTF3-203ENST00000438862 PCNX4Q63HM2 1172 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 TICAM2Q86XR7 235 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 C1orf210Q8IVY1 113 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 C12orf76Q8N812 135 aaPredicted RBP12.81□□□□□ -0.36
CSTF3-203ENST00000438862 TMEM87AQ8NBN3 555 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 CHAMP1Q96JM3 812 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 CDHR1Q96JP9 859 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 RTKNQ9BST9 563 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 CFAP47Q6ZTR5 3102 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 GPR182O15218 404 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 CXCL14O95715 111 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 ADRB1P08588 477 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 IRX6P78412 446 aaPredicted RBP12.8□□□□□ -0.36
CSTF3-203ENST00000438862 GIT2Q14161 759 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 TMEM266Q2M3C6 531 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 PHLDB3Q6NSJ2 640 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 CCDC149Q6ZUS6 474 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 TBC1D10CQ8IV04 446 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 STAG2Q8N3U4 1231 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 ENAHQ8N8S7 591 aaPredicted RBP12.8□□□□□ -0.36
CSTF3-203ENST00000438862 EVI5LQ96CN4 794 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 NCDNQ9UBB6 729 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 DENND4AQ7Z401 1863 aa12.8□□□□□ -0.36
CSTF3-203ENST00000438862 MAP1BP46821 2468 aaKnown RBP12.8□□□□□ -0.36
CSTF3-203ENST00000438862 KRBA1A5PL33 1030 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 ZNF213O14771 459 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 FGFR1P11362 822 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 LMNB2Q03252 620 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
CSTF3-203ENST00000438862 LRRC55Q6ZSA7 311 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 GPR149Q86SP6 731 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 LRRC43Q8N309 656 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 SECISBP2LQ93073 1101 aaKnown RBP12.79□□□□□ -0.36
CSTF3-203ENST00000438862 GPRASP2Q96D09 838 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 ZBTB10Q96DT7 871 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 CASD1Q96PB1 797 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 CDV3Q9UKY7 258 aaKnown RBP12.79□□□□□ -0.36
CSTF3-203ENST00000438862 ST3GAL5Q9UNP4 418 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 SIT1Q9Y3P8 196 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 NOC2LQ9Y3T9 749 aaKnown RBP12.79□□□□□ -0.36
CSTF3-203ENST00000438862 IRAK3Q9Y616 596 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 NEDD4P46934 1319 aa12.79□□□□□ -0.36
CSTF3-203ENST00000438862 ATP9AO75110 1047 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 CFHP08603 1231 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 KCNA2P16389 499 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 CA8P35219 290 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 ZNF528Q3MIS6 628 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 KANK3Q6NY19 840 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 CABP7Q86V35 215 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 PPFIBP1Q86W92 1011 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 HOMER1Q86YM7 354 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 ABI1Q8IZP0 508 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 SLC39A11Q8N1S5 342 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 NXPE3Q969Y0 559 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 AZI2Q9H6S1 392 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 RIOX1Q9H6W3 641 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 TBC1D17Q9HA65 648 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 PPP4R2Q9NY27 417 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 DLGAP2Q9P1A6 1054 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 ZSWIM5Q9P217 1185 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 MAD2L2Q9UI95 211 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 PCDHB15Q9Y5E8 787 aa12.78□□□□□ -0.36
CSTF3-203ENST00000438862 SPTBN2O15020 2390 aa12.77□□□□□ -0.36
CSTF3-203ENST00000438862 PNMA6FA0A0J9YX94 578 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 CARNS1A5YM72 827 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.37
CSTF3-203ENST00000438862 SPTLC1O15269 473 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 MAFGO15525 162 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 NARSO43776 548 aaKnown RBP12.77□□□□□ -0.37
CSTF3-203ENST00000438862 EPCAMP16422 314 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 MX1P20591 662 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 ALDH7A1P49419 539 aaKnown RBP12.77□□□□□ -0.37
CSTF3-203ENST00000438862 LETM2Q2VYF4 491 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 SPECC1Q5M775 1068 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 MTHFD1LQ6UB35 978 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 TMC5Q6UXY8 1006 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 SLC22A17Q8WUG5 538 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 FAM227BQ96M60 508 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 PIGSQ96S52 555 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 RWDD1Q9H446 243 aaPredicted RBP12.77□□□□□ -0.37
CSTF3-203ENST00000438862 SFXN1Q9H9B4 322 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 GINS2Q9Y248 185 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 CHD8Q9HCK8 2581 aa12.77□□□□□ -0.37
CSTF3-203ENST00000438862 A0A0D9SFI3 127 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.76□□□□□ -0.37
CSTF3-203ENST00000438862 DCDC2BA2VCK2 349 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 DCNP07585 359 aaKnown RBP12.76□□□□□ -0.37
CSTF3-203ENST00000438862 SRFP11831 508 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 PBX3P40426 434 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 POLGP54098 1239 aaPredicted RBP12.76□□□□□ -0.37
CSTF3-203ENST00000438862 MFAP1P55081 439 aaKnown RBP12.76□□□□□ -0.37
CSTF3-203ENST00000438862 PLCB4Q15147 1175 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 IFIT1BQ5T764 474 aaKnown RBP12.76□□□□□ -0.37
CSTF3-203ENST00000438862 C15orf39Q6ZRI6 1047 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 PLPPR4Q7Z2D5 763 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
CSTF3-203ENST00000438862 DDX12PQ92771 950 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms