RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MMP14P50281 582 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 NPEPPSP55786 919 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 ADAT2Q7Z6V5 191 aaKnown RBP12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 CPLX4Q7Z7G2 160 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 MSTO1Q9BUK6 570 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 PDGFDQ9GZP0 370 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 ODF2LQ9ULJ1 636 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 PKD1L3Q7Z443 1732 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 ABCD1P33897 745 aa12.52□□□□□ -0.4
TRAPPC9-202ENST00000438773 SAAL1Q96ER3 474 aa12.52□□□□□ -0.4
TRAPPC9-202ENST00000438773 CAMKK2Q96RR4 588 aa12.52□□□□□ -0.4
TRAPPC9-202ENST00000438773 MMS19Q96T76 1030 aa12.52□□□□□ -0.4
TRAPPC9-202ENST00000438773 POLR3CQ9BUI4 534 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC9-202ENST00000438773 KIAA1683Q9H0B3 1180 aa12.52□□□□□ -0.4
TRAPPC9-202ENST00000438773 MTRF1LQ9UGC7 380 aaKnown RBP12.52□□□□□ -0.4
TRAPPC9-202ENST00000438773 JRKLQ9Y4A0 524 aa12.52□□□□□ -0.4
TRAPPC9-202ENST00000438773 SLC26A4O43511 780 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 MESDQ14696 234 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 PLA2G4FQ68DD2 849 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 EXOC8Q8IYI6 725 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 ANKRD13AQ8IZ07 590 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 CCDC155Q8N6L0 562 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 ZNF668Q96K58 619 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 MMP19Q99542 508 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 FAM213AQ9BRX8 229 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 PCDHB4Q9Y5E5 795 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 A0A1W2PRG0 241 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 NSFP46459 744 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 CCT5P48643 541 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 BPIFB4P59827 614 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 YWHAEP62258 255 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 MICALCLQ6ZW33 695 aa12.52□□□□□ -0.41
TRAPPC9-202ENST00000438773 DOT1LQ8TEK3 1739 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 RSPH10B2B2RC85 870 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 FAM86B1E9PN63 330 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 KRIT1O00522 736 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 FAM86B2P0C5J1 330 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 RSPH10BP0C881 870 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 P4HA1P13674 534 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 VAMP7P51809 220 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 EDRF1Q3B7T1 1238 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 TKFCQ3LXA3 575 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 TTI2Q6NXR4 508 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 FRMD5Q7Z6J6 570 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 THNSL1Q8IYQ7 743 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 FAM167AQ96KS9 214 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 AGTPBP1Q9UPW5 1226 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 UTP11Q9Y3A2 253 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 COL18A1P39060 1754 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 CCDC151A5D8V7 595 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 GOLGA6BA6NDN3 693 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 ATP8B1O43520 1251 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 VSNL1P62760 191 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 LACTBP83111 547 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 GFPT1Q06210 699 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 BRD3Q15059 726 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 BEND6Q5SZJ8 279 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 NT5DC1Q5TFE4 455 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 NAA35Q5VZE5 725 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 SLFN12LQ6IEE8 588 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 RINT1Q6NUQ1 792 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 UBLCP1Q8WVY7 318 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 PSPC1Q8WXF1 523 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 MTRQ99707 1265 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 GLIS2Q9BZE0 524 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 UNC45AQ9H3U1 944 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 FZD1Q9UP38 647 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 ROBO3Q96MS0 1386 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 COL1A1P02452 1464 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 ITIH6Q6UXX5 1313 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 CLDN3O15551 220 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 GGPS1O95749 300 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 POLR3FQ9H1D9 316 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 PPANQ9NQ55 473 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 SIPA1L3O60292 1781 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 HUNKP57058 714 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 SLC8A3P57103 927 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 MAPK6Q16659 721 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 TATDN1Q6P1N9 297 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 CCDC105Q8IYK2 499 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 UHMK1Q8TAS1 419 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 PNMA5Q96PV4 448 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 SYT17Q9BSW7 474 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 RUSC1Q9BVN2 902 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 APOL6Q9BWW8 343 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 AP5M1Q9H0R1 490 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 ADARB2Q9NS39 739 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 NXF1Q9UBU9 619 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 TFR2Q9UP52 801 aa12.51□□□□□ -0.41
TRAPPC9-202ENST00000438773 KLRG2A4D1S0 409 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 STAT5BP51692 787 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 TTLL4Q14679 1199 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 XKR3Q5GH77 459 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 CCDC121Q6ZUS5 278 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 BCAS4Q8TDM0 211 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 NLRP7Q8WX94 980 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 TNFRSF25Q93038 417 aa12.5□□□□□ -0.41
TRAPPC9-202ENST00000438773 ZNF653Q96CK0 615 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms