RNA–Protein interactions for RNA: ENST00000438618.2

LINC00271-203, long intergenic non-protein coding RNA 271, humanhuman

TSL 3 BASIC

Gene LINC00271, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-203ENST00000438618 ACVR2BQ13705 512 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 MAP7Q14244 749 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 CCDC96Q2M329 555 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 AKNAD1Q5T1N1 836 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 KIAA0319Q5VV43 1072 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 TTBK2Q6IQ55 1244 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 CCDC174Q6PII3 467 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 CWC27Q6UX04 472 aaKnown RBP8.42□□□□□ -1.06
LINC00271-203ENST00000438618 MAMDC4Q6UXC1 1216 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 ZNF589Q86UQ0 364 aaPredicted RBP8.42□□□□□ -1.06
LINC00271-203ENST00000438618 TTC14Q96N46 770 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 TMEM47Q9BQJ4 181 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 DIAPH3Q9NSV4 1193 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 TCP11L1Q9NUJ3 509 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 ZHX1Q9UKY1 873 aaPredicted RBP8.42□□□□□ -1.06
LINC00271-203ENST00000438618 CCDC171Q6TFL3 1326 aa8.42□□□□□ -1.06
LINC00271-203ENST00000438618 ZNFX1Q9P2E3 1918 aaKnown RBP8.42□□□□□ -1.06
LINC00271-203ENST00000438618 PLIN4Q96Q06 1357 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 SYNGAP1Q96PV0 1343 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 HIP1O00291 1037 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 SLC16A2P36021 539 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 NOVP48745 357 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 CNTN2Q02246 1040 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 KCNA10Q16322 511 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 CPSF6Q16630 551 aaKnown RBP eCLIP8.41□□□□□ -1.06
LINC00271-203ENST00000438618 TKFCQ3LXA3 575 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 CCDC144CPQ8IYA2 1237 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 TDHQ8IZJ6 230 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 DCAF4Q8WV16 495 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 CITED4Q96RK1 184 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 NIF3L1Q9GZT8 377 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 ABHD16BQ9H3Z7 469 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 RNF41Q9H4P4 317 aaPredicted RBP8.41□□□□□ -1.06
LINC00271-203ENST00000438618 ACAD9Q9H845 621 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 SPC25Q9HBM1 224 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 RNF146Q9NTX7 359 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 ACTL7BQ9Y614 415 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 TRIOBPQ9H2D6 2365 aa8.41□□□□□ -1.06
LINC00271-203ENST00000438618 ZNF536O15090 1300 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 FRMPD2Q68DX3 1309 aaPredicted RBP8.4□□□□□ -1.06
LINC00271-203ENST00000438618 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 ASB14A6NK59 587 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 CYP26A1O43174 497 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 ADAMTS4O75173 837 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 DUSP11O75319 330 aaKnown RBP8.4□□□□□ -1.06
LINC00271-203ENST00000438618 NFICP08651 508 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 PCP11498 1178 aaKnown RBP8.4□□□□□ -1.06
LINC00271-203ENST00000438618 FOSL1P15407 271 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 ARHGAP4P98171 946 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 TLE2Q04725 743 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 CCDC144BQ3MJ40 725 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 TRIM60Q495X7 471 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 BTNL9Q6UXG8 535 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 NOL8Q76FK4 1167 aaKnown RBP8.4□□□□□ -1.06
LINC00271-203ENST00000438618 ARMCX2Q7L311 632 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 NUP133Q8WUM0 1156 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 ESR2Q92731 530 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 ZNF576Q9H609 170 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 PRDM5Q9NQX1 630 aaPredicted RBP8.4□□□□□ -1.06
LINC00271-203ENST00000438618 CTNNA3Q9UI47 895 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 CCPG1Q9ULG6 757 aa8.4□□□□□ -1.06
LINC00271-203ENST00000438618 SMCHD1A6NHR9 2005 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 ZMYM6O95789 1325 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 COL11A1P12107 1806 aaPredicted RBP8.39□□□□□ -1.07
LINC00271-203ENST00000438618 B3GALT4O96024 378 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 ICAM1P05362 532 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 C6orf222P0C671 652 aaPredicted RBP8.39□□□□□ -1.07
LINC00271-203ENST00000438618 ASPAP45381 313 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 ACLYP53396 1101 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 IRX6P78412 446 aaPredicted RBP8.39□□□□□ -1.07
LINC00271-203ENST00000438618 TNFAIP2Q03169 654 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 LRIT3Q3SXY7 679 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 CCDC178Q5BJE1 867 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 MUM1L1Q5H9M0 696 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 SYDE2Q5VT97 1194 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 IQSEC1Q6DN90 963 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 NSMFQ6X4W1 530 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 FAM133AQ8N9E0 248 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 PCSK9Q8NBP7 692 aaKnown RBP8.39□□□□□ -1.07
LINC00271-203ENST00000438618 KLHDC9Q8NEP7 349 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 BADQ92934 168 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 NRSN2Q9GZP1 204 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 A1CFQ9NQ94 594 aaKnown RBP8.39□□□□□ -1.07
LINC00271-203ENST00000438618 GREB1LQ9C091 1923 aaPredicted RBP8.39□□□□□ -1.07
LINC00271-203ENST00000438618 MYH4Q9Y623 1939 aa8.39□□□□□ -1.07
LINC00271-203ENST00000438618 LAMA2P24043 3122 aaKnown RBP8.38□□□□□ -1.07
LINC00271-203ENST00000438618 A0A0G2JMZ2 1700 aa8.38□□□□□ -1.07
LINC00271-203ENST00000438618 A0A1W2PQ45 241 aaPredicted RBP8.38□□□□□ -1.07
LINC00271-203ENST00000438618 A0A1W2PQY0 241 aa8.38□□□□□ -1.07
LINC00271-203ENST00000438618 TRIM43BA6NCK2 446 aa8.38□□□□□ -1.07
LINC00271-203ENST00000438618 DCDC2CA8MYV0 355 aa8.38□□□□□ -1.07
LINC00271-203ENST00000438618 EIF1AYO14602 144 aaKnown RBP8.38□□□□□ -1.07
LINC00271-203ENST00000438618 DYNC1LI2O43237 492 aaPredicted RBP8.38□□□□□ -1.07
LINC00271-203ENST00000438618 PQBP1O60828 265 aaKnown RBP8.38□□□□□ -1.07
LINC00271-203ENST00000438618 CTSBP07858 339 aa8.38□□□□□ -1.07
LINC00271-203ENST00000438618 PDHBP11177 359 aa8.38□□□□□ -1.07
LINC00271-203ENST00000438618 TXKP42681 527 aa8.38□□□□□ -1.07
LINC00271-203ENST00000438618 GJA9P57773 515 aa8.38□□□□□ -1.07
LINC00271-203ENST00000438618 AP3B2Q13367 1082 aa8.38□□□□□ -1.07
LINC00271-203ENST00000438618 BAATQ14032 418 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms