RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ASB14A6NK59 587 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 SUPT3HB4E1H0 165 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 SERPINI2O75830 405 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 HIST1H2AGP0C0S8 130 aaPredicted RBP11.94□□□□□ -0.5
SCN4A-201ENST00000435607 FDX1P10109 184 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 HIST1H2ADP20671 130 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 BBS9Q3SYG4 887 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 SLC27A3Q5K4L6 730 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 C16orf62Q7Z3J2 963 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 MAML1Q92585 1016 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 P2RX5Q93086 422 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 HIST1H2AHQ96KK5 128 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 HIST1H2AJQ99878 128 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 H2AFJQ9BTM1 129 aa11.94□□□□□ -0.5
SCN4A-201ENST00000435607 DYRK3O43781 588 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 ESRRAP11474 423 aaPredicted RBP11.93□□□□□ -0.5
SCN4A-201ENST00000435607 PHKG2P15735 406 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 GCKP35557 465 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 NCKAP1LP55160 1127 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 TRIM48Q8IWZ4 208 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 PPHLN1Q8NEY8 458 aaKnown RBP11.93□□□□□ -0.5
SCN4A-201ENST00000435607 B4GALNT2Q8NHY0 566 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 PHACTR3Q96KR7 559 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 WRNIP1Q96S55 665 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 ZHX2Q9Y6X8 837 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 WDR62O43379 1518 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 TADA2AO75478 443 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 CIAO1O76071 339 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 RMDN3Q96TC7 470 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 EML4Q9HC35 981 aaKnown RBP11.93□□□□□ -0.5
SCN4A-201ENST00000435607 PSD3Q9NYI0 1048 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 ARHGAP26Q9UNA1 814 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 GDAQ9Y2T3 454 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 USP19O94966 1318 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 CYP27A1Q02318 531 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 ARHGEF7Q14155 803 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 ADCK2Q7Z695 626 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 TBC1D22BQ9NU19 505 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 RASSF10A6NK89 507 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 PRRG1O14668 218 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 JAK2O60674 1132 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 EFTUD2Q15029 972 aaKnown RBP eCLIP11.93□□□□□ -0.5
SCN4A-201ENST00000435607 KSR1Q8IVT5 923 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 RMDN1Q96DB5 314 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 GOLGA8IPA6NC78 632 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 GOLGA8TH3BQL2 631 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 NSUN6Q8TEA1 469 aaKnown RBP11.93□□□□□ -0.5
SCN4A-201ENST00000435607 GFPT2O94808 682 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 ALS2CLQ60I27 953 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 SPATA2LQ8IUW3 424 aaPredicted RBP11.93□□□□□ -0.5
SCN4A-201ENST00000435607 OSBPL10Q9BXB5 764 aa11.93□□□□□ -0.5
SCN4A-201ENST00000435607 UBA6A0AVT1 1052 aaPredicted RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 ARL4CP56559 192 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 HPCAP84074 193 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 RHOT2Q8IXI1 618 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 THNSL1Q8IYQ7 743 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 APOBEC2Q9Y235 224 aaKnown RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 SERPING1P05155 500 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 HDAC4P56524 1084 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 PEX3P56589 373 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 DAB2P98082 770 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 TRIML2Q8N7C3 387 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 DIS3Q9Y2L1 958 aaKnown RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 SH3BP1Q9Y3L3 701 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 SUPT3HO75486 399 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 PLA2G4BP0C869 781 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 HSD17B4P51659 736 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 NCALDP61601 193 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 AP3B2Q13367 1082 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 LRRC8BQ6P9F7 803 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 MRPL4Q9BYD3 311 aaKnown RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 TRAF3IP3Q9Y228 551 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 SYCP2Q9BX26 1530 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 GOLGA8RI6L899 631 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 ZBTB7BO15156 539 aaPredicted RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 MAPK13O15264 365 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 FGAP02671 866 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 PLTPP55058 493 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 KRT17Q04695 432 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 NR1H3Q13133 447 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 TSEN34Q9BSV6 310 aaKnown RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 COPEO14579 308 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 SLC16A2P36021 539 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 IFNAR2P48551 515 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 EIF4A1P60842 406 aaKnown RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 MDM2Q00987 491 aaPredicted RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 GABPB1Q06547 395 aaPredicted RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 ZNF302Q9NR11 478 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 FAM32AQ9Y421 112 aaKnown RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 PFKFB2O60825 505 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 SLC9A1P19634 815 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 SFNP31947 248 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 EIF3BP55884 814 aaKnown RBP11.92□□□□□ -0.5
SCN4A-201ENST00000435607 KLHL29Q96CT2 875 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 TNIP3Q96KP6 325 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 ZFYVE28Q9HCC9 887 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 GINM1Q9NU53 330 aa11.92□□□□□ -0.5
SCN4A-201ENST00000435607 UBE4BO95155 1302 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms