RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 METTL13Q8N6R0 699 aa17.52■□□□□ 0.39
HLA-DQB2-231ENST00000435145 NEK9Q8TD19 979 aa17.52■□□□□ 0.39
HLA-DQB2-231ENST00000435145 TMEM174Q8WUU8 243 aa17.52■□□□□ 0.39
HLA-DQB2-231ENST00000435145 PIK3R5Q8WYR1 880 aa17.52■□□□□ 0.39
HLA-DQB2-231ENST00000435145 ARL8AQ96BM9 186 aa17.52■□□□□ 0.39
HLA-DQB2-231ENST00000435145 RIT2Q99578 217 aa17.52■□□□□ 0.39
HLA-DQB2-231ENST00000435145 GOLPH3Q9H4A6 298 aa17.52■□□□□ 0.39
HLA-DQB2-231ENST00000435145 LMNB1P20700 586 aa17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 IRX5P78411 483 aaPredicted RBP17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 SPDYE2Q495Y8 402 aa17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CBWD6Q4V339 395 aa17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CBWD3Q5JTY5 395 aa17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CBWD5Q5RIA9 395 aa17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 NT5DC3Q86UY8 548 aa17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 KSR1Q8IVT5 923 aa17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 SYCE1Q8N0S2 351 aa17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 DAW1Q8N136 415 aa17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 C1orf131Q8NDD1 294 aaKnown RBP17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 TEKT3Q9BXF9 490 aa17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 LCMT1Q9UIC8 334 aa17.51■□□□□ 0.39
HLA-DQB2-231ENST00000435145 PGRMC1O00264 195 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 BCRP11274 1271 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 IRAK1P51617 712 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 HSD17B4P51659 736 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 GALCP54803 685 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 UBXN2AP68543 259 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 DRAP1Q14919 205 aaPredicted RBP17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 ODR4Q5SWX8 454 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 EMC10Q5UCC4 262 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 LDHDQ86WU2 507 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 FMNL3Q8IVF7 1028 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 U2AF1L4Q8WU68 220 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 HES6Q96HZ4 224 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 MXRA8Q9BRK3 442 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 ISCUQ9H1K1 167 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 FEM1BQ9UK73 627 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 DNAJC12Q9UKB3 198 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 RRP15Q9Y3B9 282 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 RPTORQ8N122 1335 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 LOXHD1Q8IVV2 1947 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CLRN2A0PK11 232 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 IPO5O00410 1097 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CEP104O60308 925 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 ECHS1P30084 290 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 HSPA9P38646 679 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 RNASE9P60153 205 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 FKBP1CQ5VVH2 108 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 PEX26Q7Z412 305 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 IFT81Q8WYA0 676 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CCDC43Q96MW1 224 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 LXNQ9BS40 222 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 INTS2Q9H0H0 1204 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 TAF1DQ9H5J8 278 aaPredicted RBP17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 FRMD4BQ9Y2L6 1034 aa17.5■□□□□ 0.39
HLA-DQB2-231ENST00000435145 GRIN2DO15399 1336 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 ZNF233A6NK53 670 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CCDC188H7C350 402 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 TMEM253P0C7T8 217 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 ERVK-9P63128 1117 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CUL1Q13616 776 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 TRADDQ15628 312 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CFAP58Q5T655 872 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 LMO3Q8TAP4 145 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 RUFY1Q96T51 708 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 TSPYL1Q9H0U9 437 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 APEX2Q9UBZ4 518 aa17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 TTC7AQ9ULT0 858 aaPredicted RBP17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 NOC2LQ9Y3T9 749 aaKnown RBP17.49■□□□□ 0.39
HLA-DQB2-231ENST00000435145 MYO1CO00159 1063 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 MAPTP10636 758 aaKnown RBP17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 ITGB5P18084 799 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 RFX1P22670 979 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 PTGER2P43116 358 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 GHRHRQ02643 423 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 PPATQ06203 517 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 NIPA1Q7RTP0 329 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 KLHL7Q8IXQ5 586 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 RFFLQ8WZ73 363 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 ARHGEF35A5YM69 484 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 HIP1RO75146 1068 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 TRIM49P0CI25 452 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 TRIM49CP0CI26 452 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CYP2J2P51589 502 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 MYL7Q01449 175 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 BFSP1Q12934 665 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 KIF22Q14807 665 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 DLGAP5Q15398 846 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 GLYCTKQ8IVS8 523 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 BANK1Q8NDB2 785 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CAPS2Q9BXY5 557 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 FBXO28Q9NVF7 368 aa17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 FEZ2Q9UHY8 353 aaPredicted RBP17.48■□□□□ 0.39
HLA-DQB2-231ENST00000435145 A6NNZ2 444 aa17.47■□□□□ 0.39
HLA-DQB2-231ENST00000435145 SART1O43290 800 aaKnown RBP17.47■□□□□ 0.39
HLA-DQB2-231ENST00000435145 CAP2P40123 477 aa17.47■□□□□ 0.39
HLA-DQB2-231ENST00000435145 MAP3K10Q02779 954 aa17.47■□□□□ 0.39
HLA-DQB2-231ENST00000435145 ALCAMQ13740 583 aa17.47■□□□□ 0.39
HLA-DQB2-231ENST00000435145 TUBB8Q3ZCM7 444 aa17.47■□□□□ 0.39
HLA-DQB2-231ENST00000435145 C12orf56Q8IXR9 622 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms