RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 NOP56O00567 594 aaKnown RBP12.48□□□□□ -0.41
LINC00539-203ENST00000434601 GH1P01241 217 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 ASGR1P07306 291 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 GUCY2CP25092 1073 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 PRCPP42785 496 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 CDK7P50613 346 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 ARHGAP1Q07960 439 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 STK4Q13043 487 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 PAK1Q13153 545 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 NCAPHQ15003 741 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 FAM26FQ5R3K3 315 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 FAM160B1Q5W0V3 765 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 PLA2G4FQ68DD2 849 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 PADI6Q6TGC4 694 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 OTUD6AQ7L8S5 288 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 ADSSL1Q8N142 457 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 TMEM199Q8N511 208 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 ENOX1Q8TC92 643 aaKnown RBP12.48□□□□□ -0.41
LINC00539-203ENST00000434601 AFAP1L1Q8TED9 768 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 MYLIPQ8WY64 445 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 SEPT1Q8WYJ6 367 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 ANP32BQ92688 251 aaKnown RBP12.48□□□□□ -0.41
LINC00539-203ENST00000434601 COPS5Q92905 334 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 HPS3Q969F9 1004 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 SPATA33Q96N06 139 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 GPR20Q99678 358 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 SEZ6LQ9BYH1 1024 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 SEPT9Q9UHD8 586 aaPredicted RBP12.48□□□□□ -0.41
LINC00539-203ENST00000434601 TBX21Q9UL17 535 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 ODF2LQ9ULJ1 636 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 MAFBQ9Y5Q3 323 aaPredicted RBP12.48□□□□□ -0.41
LINC00539-203ENST00000434601 MYH9P35579 1960 aaKnown RBP12.48□□□□□ -0.41
LINC00539-203ENST00000434601 VCANP13611 3396 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 EMSYQ7Z589 1322 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 TMEM150BA6NC51 233 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 RSPH10B2B2RC85 870 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 PSMA7O14818 248 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 NKRFO15226 690 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC00539-203ENST00000434601 ZEB2O60315 1214 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 USO1O60763 962 aaKnown RBP12.47□□□□□ -0.41
LINC00539-203ENST00000434601 LGR5O75473 907 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 CABYRO75952 493 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 FAM13AO94988 1023 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 STBD1O95210 358 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 OATP04181 439 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 RSPH10BP0C881 870 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 GAP43P17677 238 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 DNAJB2P25686 324 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 TCF7P36402 384 aaPredicted RBP12.47□□□□□ -0.41
LINC00539-203ENST00000434601 EPHB4P54760 987 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 NKX3-2P78367 333 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 LAMC2Q13753 1193 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 XKR9Q5GH70 373 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 XKR3Q5GH77 459 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 UTP14CQ5TAP6 766 aaKnown RBP12.47□□□□□ -0.41
LINC00539-203ENST00000434601 ANO5Q75V66 913 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 SFR1Q86XK3 245 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 NELFBQ8WX92 580 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 EMID1Q96A84 441 aaPredicted RBP12.47□□□□□ -0.41
LINC00539-203ENST00000434601 PCYT2Q99447 389 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 TIPINQ9BVW5 301 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 ZHX3Q9H4I2 956 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 SLC39A2Q9NP94 309 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 RWDD2AQ9UIY3 292 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 MAPK8IP1Q9UQF2 711 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 COL4A3BPQ9Y5P4 624 aa12.47□□□□□ -0.41
LINC00539-203ENST00000434601 TTC28Q96AY4 2481 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.46□□□□□ -0.41
LINC00539-203ENST00000434601 HIP1RO75146 1068 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 ZNF131P52739 623 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 STX17P56962 302 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 TNFAIP2Q03169 654 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 HSDL1Q3SXM5 330 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 DUSP28Q4G0W2 176 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 HERC4Q5GLZ8 1057 aaPredicted RBP12.46□□□□□ -0.41
LINC00539-203ENST00000434601 TMEM63BQ5T3F8 832 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 SPATA1Q5VX52 437 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 IQSEC1Q6DN90 963 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 GUF1Q8N442 669 aaKnown RBP12.46□□□□□ -0.41
LINC00539-203ENST00000434601 DHTKD1Q96HY7 919 aaPredicted RBP12.46□□□□□ -0.41
LINC00539-203ENST00000434601 FAM167AQ96KS9 214 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 CEP170P1Q96L14 293 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 MED15Q96RN5 788 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 AZI2Q9H6S1 392 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 PARVGQ9HBI0 331 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 SEL1LQ9UBV2 794 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 PCDHA2Q9Y5H9 948 aa12.46□□□□□ -0.41
LINC00539-203ENST00000434601 MYH11P35749 1972 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 MYADML2A6NDP7 307 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 SMPD1P17405 629 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 ATP4AP20648 1035 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 PTGS1P23219 599 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 STAT5BP51692 787 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 NPEPPSP55786 919 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 PLCB2Q00722 1185 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 MAPK7Q13164 816 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 PSRC1Q6PGN9 363 aaPredicted RBP12.45□□□□□ -0.42
LINC00539-203ENST00000434601 SARM1Q6SZW1 724 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 TRMT1LQ7Z2T5 733 aaKnown RBP12.45□□□□□ -0.42
LINC00539-203ENST00000434601 FAM126BQ8IXS8 530 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms