RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 GBP5Q96PP8 586 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 NUDCD1Q96RS6 583 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 SEMA6BQ9H3T3 888 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 CEP72Q9P209 647 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 RGS17Q9UGC6 210 aaPredicted RBP8□□□□□ -1.13
SYNPO2-203ENST00000434046 COL4A3BPQ9Y5P4 624 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 LAMA4Q16363 1823 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 DISP2A7MBM2 1401 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 SRRM3A6NNA2 597 aaPredicted RBP8□□□□□ -1.13
SYNPO2-203ENST00000434046 MYL1P05976 194 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 ATP4AP20648 1035 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 SLC16A2P36021 539 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 LAMB3Q13751 1172 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 USH1GQ495M9 461 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 GRIPAP1Q4V328 841 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 ASPRV1Q53RT3 343 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 HERC4Q5GLZ8 1057 aaPredicted RBP8□□□□□ -1.13
SYNPO2-203ENST00000434046 POTEAQ6S8J7 498 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 SP8Q8IXZ3 490 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 GBP7Q8N8V2 638 aaPredicted RBP8□□□□□ -1.13
SYNPO2-203ENST00000434046 EPS8L3Q8TE67 593 aaKnown RBP8□□□□□ -1.13
SYNPO2-203ENST00000434046 COA7Q96BR5 231 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 CCDC17Q96LX7 622 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 CRAMP1Q96RY5 1269 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 EHMT1Q9H9B1 1298 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 PNMA3Q9UL41 463 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 AGAP1Q9UPQ3 857 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 TACC3Q9Y6A5 838 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 VPS41P49754 854 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 FKBP3Q00688 224 aaKnown RBP8□□□□□ -1.13
SYNPO2-203ENST00000434046 ICA1Q05084 483 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 ITIH4Q14624 930 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 TNIP1Q15025 636 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 DLGAP5Q15398 846 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 SEC23AQ15436 765 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 ZFYVE27Q5T4F4 411 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 C6orf118Q5T5N4 469 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 SYCE1Q8N0S2 351 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8□□□□□ -1.13
SYNPO2-203ENST00000434046 CORO1CQ9ULV4 474 aaPredicted RBP8□□□□□ -1.13
SYNPO2-203ENST00000434046 MARF1Q9Y4F3 1742 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 IRF6O14896 467 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 KLRC4O43908 158 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 ACTN1P12814 892 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 GRM4Q14833 912 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 NAALADL2Q58DX5 795 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 SLFN13Q68D06 897 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 KCTD1Q719H9 257 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 SPATA21Q7Z572 469 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 PPFIBP2Q8ND30 876 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 NEDD1Q8NHV4 660 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 TBCKQ8TEA7 893 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 LARP4BQ92615 738 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 GLT8D2Q9H1C3 349 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 PSTPIP2Q9H939 334 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 EBF2Q9HAK2 575 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 ARHGEF10LQ9HCE6 1279 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 SCOCQ9UIL1 159 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 SIK3Q9Y2K2 1263 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 USH1CQ9Y6N9 552 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 COL14A1Q05707 1796 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 ARFGEF2Q9Y6D5 1785 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 MYH13Q9UKX3 1938 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 RGL2O15211 777 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 PJA2O43164 708 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 SMNDC1O75940 238 aaKnown RBP eCLIP7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 FERP16591 822 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 ALDH3A1P30838 453 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 ERFP50548 548 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 USP11P51784 963 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 NCALDP61601 193 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 GPATCH4Q5T3I0 446 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 ZNF572Q7Z3I7 529 aaPredicted RBP7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 ZC3H18Q86VM9 953 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 NAP1L3Q99457 506 aaPredicted RBP7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 INTUQ9ULD6 942 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 FAM205AQ6ZU69 1335 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 KLHL33A6NCF5 533 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 USP17L5A8MUK1 530 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 TCP10L2B9ZVM9 353 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 TBCAO75347 108 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 PRPHP41219 470 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 KLC1Q07866 573 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 ADAM9Q13443 819 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 PDCD2Q16342 344 aaPredicted RBP7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 LONRF1Q17RB8 773 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 CHADLQ6NUI6 762 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 B4GALNT2Q8NHY0 566 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 SHISA4Q96DD7 197 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 NAP1L4Q99733 375 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 CUEDC2Q9H467 287 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 SLITRK6Q9H5Y7 841 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 KBTBD4Q9NVX7 518 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 ASIC3Q9UHC3 531 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 DAGLAQ9Y4D2 1042 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 PCDHA1Q9Y5I3 950 aa7.99□□□□□ -1.13
SYNPO2-203ENST00000434046 FLT1P17948 1338 aa7.98□□□□□ -1.13
SYNPO2-203ENST00000434046 DPPA5A6NC42 116 aa7.98□□□□□ -1.13
SYNPO2-203ENST00000434046 FAM196BA6NMK8 535 aa7.98□□□□□ -1.13
SYNPO2-203ENST00000434046 ASAP2O43150 1006 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms