RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 MMP10P09238 476 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 FCER1AP12319 257 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 EEF2P13639 858 aaKnown RBP8.2□□□□□ -1.1
COL17A1-204ENST00000433822 FGFR3P22607 806 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 RPA1P27694 616 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 MSX1P28360 303 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 LBX1P52954 281 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 ARHGAP4P98171 946 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 ICA1Q05084 483 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 SPIRE1Q08AE8 756 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 SPA17Q15506 151 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 CDC37Q16543 378 aaPredicted RBP8.2□□□□□ -1.1
COL17A1-204ENST00000433822 PTPN21Q16825 1174 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 BMT2Q1RMZ1 405 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 TEX35Q5T0J7 233 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 SLFN13Q68D06 897 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 TRIM59Q8IWR1 403 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 RNF10Q8N5U6 811 aaKnown RBP8.2□□□□□ -1.1
COL17A1-204ENST00000433822 SAMD3Q8N6K7 520 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 SYT2Q8N9I0 419 aaPredicted RBP8.2□□□□□ -1.1
COL17A1-204ENST00000433822 ETNPPLQ8TBG4 499 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 C7orf43Q8WVR3 580 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 JAKMIP2Q96AA8 810 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 BTBD6Q96KE9 485 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 PSMG3-AS1Q96PY0 264 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 CHP1Q99653 195 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 SLF1Q9BQI6 1058 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 POLR3CQ9BUI4 534 aaPredicted RBP8.2□□□□□ -1.1
COL17A1-204ENST00000433822 PARD6BQ9BYG5 372 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 NHEJ1Q9H9Q4 299 aaPredicted RBP8.2□□□□□ -1.1
COL17A1-204ENST00000433822 LUC7LQ9NQ29 371 aaKnown RBP8.2□□□□□ -1.1
COL17A1-204ENST00000433822 KCNQ5Q9NR82 932 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 NOP53Q9NZM5 478 aaKnown RBP8.2□□□□□ -1.1
COL17A1-204ENST00000433822 RNF181Q9P0P0 153 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 CEP72Q9P209 647 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 RNF14Q9UBS8 474 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.2□□□□□ -1.1
COL17A1-204ENST00000433822 FBXL5Q9UKA1 691 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 MAPK8IP1Q9UQF2 711 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 TRAF3IP3Q9Y228 551 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 PCDHA2Q9Y5H9 948 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 PCDHA1Q9Y5I3 950 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 COL4A3BPQ9Y5P4 624 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 UBE4BO95155 1302 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 SLX4Q8IY92 1834 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 CCDC85CA6NKD9 419 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 BTNL10A8MVZ5 291 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 F5H6K3 240 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 ECE2O60344 883 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 TACC1O75410 805 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 CYP11B2P19099 503 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 PLA2G4AP47712 749 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 RGS19P49795 217 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 SLC12A3P55017 1021 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 GHRHRQ02643 423 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 KLRC3Q07444 240 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 KIF5AQ12840 1032 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 NFIAQ12857 509 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 GPS2Q13227 327 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 TERF2Q15554 542 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 ABCB5Q2M3G0 1257 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 ASTE1Q2TB18 679 aaPredicted RBP8.19□□□□□ -1.1
COL17A1-204ENST00000433822 MAP9Q49MG5 647 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 C4orf17Q53FE4 359 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 CCDC122Q5T0U0 273 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 C10orf76Q5T2E6 689 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 SYDE2Q5VT97 1194 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 KIAA1328Q86T90 577 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 CD163Q86VB7 1156 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 FBXO11Q86XK2 927 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 SIAH1Q8IUQ4 282 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 FMNL3Q8IVF7 1028 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 MTMR14Q8NCE2 650 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 ABHD17AQ96GS6 310 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 CCDC42Q96M95 316 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 FUT8Q9BYC5 575 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 ACBD3Q9H3P7 528 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 ANKZF1Q9H8Y5 726 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 EHMT1Q9H9B1 1298 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 VIPAS39Q9H9C1 493 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 SLC39A2Q9NP94 309 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 PLCB1Q9NQ66 1216 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 OLFML3Q9NRN5 406 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 GINM1Q9NU53 330 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 AGPAT5Q9NUQ2 364 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 PANK4Q9NVE7 773 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 PSD3Q9NYI0 1048 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 KCND2Q9NZV8 630 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 SEL1LQ9UBV2 794 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 MTMR7Q9Y216 660 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 JRKLQ9Y4A0 524 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 SAR1BQ9Y6B6 198 aa8.19□□□□□ -1.1
COL17A1-204ENST00000433822 GTPBP10A4D1E9 387 aaKnown RBP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 DDTLA6NHG4 134 aaPredicted RBP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 MPHOSPH10O00566 681 aaKnown RBP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 PDXKO00764 312 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 EIF3DO15371 548 aaKnown RBP eCLIP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 SLC16A3O15427 465 aaKnown RBP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 EIF3JO75822 258 aaKnown RBP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 PLA2G4BP0C869 781 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms