RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 POLR3FQ9H1D9 316 aaPredicted RBP29.26■■■□□ 2.27
TMEM248-205ENST00000433271 MRPL44Q9H9J2 332 aaKnown RBP29.26■■■□□ 2.27
TMEM248-205ENST00000433271 SETD4Q9NVD3 440 aa29.26■■■□□ 2.27
TMEM248-205ENST00000433271 CD44P16070 742 aaKnown RBP29.25■■■□□ 2.27
TMEM248-205ENST00000433271 PRCPP42785 496 aa29.25■■■□□ 2.27
TMEM248-205ENST00000433271 ZNF165P49910 485 aa29.25■■■□□ 2.27
TMEM248-205ENST00000433271 MARCH8Q5T0T0 291 aa29.25■■■□□ 2.27
TMEM248-205ENST00000433271 IER5Q5VY09 327 aa29.25■■■□□ 2.27
TMEM248-205ENST00000433271 FAM178BQ8IXR5 827 aa29.25■■■□□ 2.27
TMEM248-205ENST00000433271 ADSSL1Q8N142 457 aa29.25■■■□□ 2.27
TMEM248-205ENST00000433271 TCP11Q8WWU5 503 aa29.25■■■□□ 2.27
TMEM248-205ENST00000433271 SUGCTQ9HAC7 445 aa29.25■■■□□ 2.27
TMEM248-205ENST00000433271 CABYRO75952 493 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 MAPTP10636 758 aaKnown RBP29.24■■■□□ 2.27
TMEM248-205ENST00000433271 PPP1R2P41236 205 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 ACLYP53396 1101 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 STIM1Q13586 685 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 EFCAB12Q6NXP0 572 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 MTHFD1LQ6UB35 978 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 C7orf31Q8N865 590 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 LMBR1Q8WVP7 490 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 ZNF333Q96JL9 665 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 DEFB118Q96PH6 123 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 FIZ1Q96SL8 496 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 KCNG1Q9UIX4 513 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 MYH11P35749 1972 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 SCN10AQ9Y5Y9 1956 aa29.24■■■□□ 2.27
TMEM248-205ENST00000433271 MOXD2PA6NHM9 499 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 MYCP01106 439 aaPredicted RBP29.23■■■□□ 2.27
TMEM248-205ENST00000433271 DMP1Q13316 513 aaPredicted RBP29.23■■■□□ 2.27
TMEM248-205ENST00000433271 MKRN4PQ13434 485 aaPredicted RBP29.23■■■□□ 2.27
TMEM248-205ENST00000433271 ARMC5Q96C12 935 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 IFT74Q96LB3 600 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 BPIFA3Q9BQP9 254 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 NTPCRQ9BSD7 190 aaKnown RBP29.23■■■□□ 2.27
TMEM248-205ENST00000433271 MAPK8IP1Q9UQF2 711 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 KAT6AQ92794 2004 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 ERCC5P28715 1186 aaPredicted RBP29.23■■■□□ 2.27
TMEM248-205ENST00000433271 DNM2P50570 870 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 PEX3P56589 373 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 ZNF720Q7Z2F6 126 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 GUF1Q8N442 669 aaKnown RBP29.23■■■□□ 2.27
TMEM248-205ENST00000433271 METTL13Q8N6R0 699 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 GLIS3Q8NEA6 775 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 FAM200AQ8TCP9 573 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 SPIRE2Q8WWL2 714 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 FGFBP2Q9BYJ0 223 aa29.23■■■□□ 2.27
TMEM248-205ENST00000433271 GNAT1P11488 350 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 HOXC8P31273 242 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 SMTNP53814 917 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 ADAM17P78536 824 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 DRP2Q13474 957 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 NBPF20Q3BBV1 942 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 LRRC71Q8N4P6 559 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 LINC01465Q8N7H1 131 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 SLC17A8Q8NDX2 589 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 BSNDQ8WZ55 320 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 HDAC6Q9UBN7 1215 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 FRMPD3Q5JV73 1810 aa29.22■■■□□ 2.27
TMEM248-205ENST00000433271 MBLAC1A4D2B0 266 aaPredicted RBP29.21■■■□□ 2.27
TMEM248-205ENST00000433271 TMOD1P28289 359 aa29.21■■■□□ 2.27
TMEM248-205ENST00000433271 NPTX2P47972 431 aa29.21■■■□□ 2.27
TMEM248-205ENST00000433271 PPP2R5AQ15172 486 aa29.21■■■□□ 2.27
TMEM248-205ENST00000433271 NFRKBQ6P4R8 1299 aa29.21■■■□□ 2.27
TMEM248-205ENST00000433271 EPM2AIP1Q7L775 607 aaPredicted RBP29.21■■■□□ 2.27
TMEM248-205ENST00000433271 MYOCDQ8IZQ8 938 aa29.21■■■□□ 2.27
TMEM248-205ENST00000433271 PSPC1Q8WXF1 523 aaKnown RBP29.21■■■□□ 2.27
TMEM248-205ENST00000433271 ZBTB10Q96DT7 871 aa29.21■■■□□ 2.27
TMEM248-205ENST00000433271 DHTKD1Q96HY7 919 aaPredicted RBP29.21■■■□□ 2.27
TMEM248-205ENST00000433271 C17orf102A2RUQ5 167 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 GCNT3O95395 438 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 GLRA2P23416 452 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 NMT1P30419 496 aaKnown RBP29.2■■■□□ 2.27
TMEM248-205ENST00000433271 CASP5P51878 434 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 MXD4Q14582 209 aaPredicted RBP29.2■■■□□ 2.27
TMEM248-205ENST00000433271 GSE1Q14687 1217 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 KLHL10Q6JEL2 608 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 ASAP3Q8TDY4 903 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 PPP1R13LQ8WUF5 828 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 SCFD1Q8WVM8 642 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 PRPF31Q8WWY3 499 aaKnown RBP29.2■■■□□ 2.27
TMEM248-205ENST00000433271 ST6GALNAC4Q9H4F1 302 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 PRDM10Q9NQV6 1147 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 SUCLA2Q9P2R7 463 aaPredicted RBP29.2■■■□□ 2.27
TMEM248-205ENST00000433271 OGDHLQ9ULD0 1010 aa29.2■■■□□ 2.27
TMEM248-205ENST00000433271 PSMA7O14818 248 aa29.2■■■□□ 2.26
TMEM248-205ENST00000433271 EIF3DO15371 548 aaKnown RBP eCLIP29.2■■■□□ 2.26
TMEM248-205ENST00000433271 KIF20AO95235 890 aa29.2■■■□□ 2.26
TMEM248-205ENST00000433271 NCKAP1LP55160 1127 aa29.2■■■□□ 2.26
TMEM248-205ENST00000433271 STXBP4Q6ZWJ1 553 aa29.2■■■□□ 2.26
TMEM248-205ENST00000433271 SESTD1Q86VW0 696 aa29.2■■■□□ 2.26
TMEM248-205ENST00000433271 RBSNQ9H1K0 784 aa29.2■■■□□ 2.26
TMEM248-205ENST00000433271 CBX8Q9HC52 389 aa29.2■■■□□ 2.26
TMEM248-205ENST00000433271 PCDHB13Q9Y5F0 798 aa29.2■■■□□ 2.26
TMEM248-205ENST00000433271 CCDC169A6NNP5 214 aa29.19■■■□□ 2.26
TMEM248-205ENST00000433271 MYBP10242 640 aa29.19■■■□□ 2.26
TMEM248-205ENST00000433271 NAMPTP43490 491 aa29.19■■■□□ 2.26
TMEM248-205ENST00000433271 CLCN3P51790 818 aa29.19■■■□□ 2.26
TMEM248-205ENST00000433271 ALCAMQ13740 583 aa29.19■■■□□ 2.26
TMEM248-205ENST00000433271 HIC1Q14526 733 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms