RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ABHD15Q6UXT9 468 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 ACCSQ96QU6 501 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 CARD6Q9BX69 1037 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 DEF6Q9H4E7 631 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 MYO1AQ9UBC5 1043 aa21.43■■□□□ 1.02
VRK2-205ENST00000432057 SOWAHBA6NEL2 793 aa21.42■■□□□ 1.02
VRK2-205ENST00000432057 TISP43B9A030 160 aa21.42■■□□□ 1.02
VRK2-205ENST00000432057 POTEB2H3BUK9 544 aa21.42■■□□□ 1.02
VRK2-205ENST00000432057 NCKAP1LP55160 1127 aa21.42■■□□□ 1.02
VRK2-205ENST00000432057 RAPGEF1Q13905 1077 aa21.42■■□□□ 1.02
VRK2-205ENST00000432057 EXOC3L4Q17RC7 722 aa21.42■■□□□ 1.02
VRK2-205ENST00000432057 SEPT14Q6ZU15 432 aa21.42■■□□□ 1.02
VRK2-205ENST00000432057 HAUS6Q7Z4H7 955 aa21.42■■□□□ 1.02
VRK2-205ENST00000432057 LACRTQ9GZZ8 138 aa21.42■■□□□ 1.02
VRK2-205ENST00000432057 NUCKS1Q9H1E3 243 aaKnown RBP21.42■■□□□ 1.02
VRK2-205ENST00000432057 TAF1DQ9H5J8 278 aaPredicted RBP21.42■■□□□ 1.02
VRK2-205ENST00000432057 GLTPD2A6NH11 291 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 SLC16A4O15374 487 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 PON1P27169 355 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 ICAM3P32942 547 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 PRKCEQ02156 737 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 ELF2Q15723 593 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 ZNF662Q6ZS27 426 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 CYFIP1Q7L576 1253 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 OTUD6AQ7L8S5 288 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 MNS1Q8NEH6 495 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 CEP170P1Q96L14 293 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 TMEM206Q9H813 350 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 PLCB1Q9NQ66 1216 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 SEPT9Q9UHD8 586 aaPredicted RBP21.41■■□□□ 1.02
VRK2-205ENST00000432057 FRMD4BQ9Y2L6 1034 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 IGSF9BQ9UPX0 1349 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 MYH10P35580 1976 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 AKR1B10O60218 316 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 DKC1O60832 514 aaKnown RBP eCLIP21.41■■□□□ 1.02
VRK2-205ENST00000432057 SUPT20HL2P0C7V6 817 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 VAV2P52735 878 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 SOX10P56693 466 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 GTF2BQ00403 316 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 SPA17Q15506 151 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 TDRD12Q587J7 1177 aaKnown RBP21.41■■□□□ 1.02
VRK2-205ENST00000432057 GBP6Q6ZN66 633 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 ARMC9Q7Z3E5 817 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 SLC9A9Q8IVB4 645 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 SYN2Q92777 582 aaPredicted RBP21.41■■□□□ 1.02
VRK2-205ENST00000432057 TXNRD2Q9NNW7 524 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 GCNT4Q9P109 453 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 FHOD1Q9Y613 1164 aa21.41■■□□□ 1.02
VRK2-205ENST00000432057 SIP14410 1827 aa21.4■■□□□ 1.02
VRK2-205ENST00000432057 CTAGE9A4FU28 777 aa21.4■■□□□ 1.02
VRK2-205ENST00000432057 KRT86O43790 486 aa21.4■■□□□ 1.02
VRK2-205ENST00000432057 EXOC3O60645 756 aa21.4■■□□□ 1.02
VRK2-205ENST00000432057 LCA5LO95447 670 aa21.4■■□□□ 1.02
VRK2-205ENST00000432057 MAPK8IP2Q13387 824 aaPredicted RBP21.4■■□□□ 1.02
VRK2-205ENST00000432057 KLHDC7AQ5VTJ3 777 aa21.4■■□□□ 1.02
VRK2-205ENST00000432057 MIS18BP1Q6P0N0 1132 aa21.4■■□□□ 1.02
VRK2-205ENST00000432057 ZNF526Q8TF50 670 aaPredicted RBP21.4■■□□□ 1.02
VRK2-205ENST00000432057 NAPGQ99747 312 aaPredicted RBP21.4■■□□□ 1.02
VRK2-205ENST00000432057 ST6GALNAC4Q9H4F1 302 aa21.4■■□□□ 1.02
VRK2-205ENST00000432057 PCIF1Q9H4Z3 704 aa21.4■■□□□ 1.02
VRK2-205ENST00000432057 SIX2Q9NPC8 291 aa21.4■■□□□ 1.02
VRK2-205ENST00000432057 PLXNA1Q9UIW2 1896 aa21.4■■□□□ 1.02
VRK2-205ENST00000432057 SERPING1P05155 500 aa21.39■■□□□ 1.02
VRK2-205ENST00000432057 TRIM49P0CI25 452 aa21.39■■□□□ 1.02
VRK2-205ENST00000432057 TRIM49CP0CI26 452 aa21.39■■□□□ 1.02
VRK2-205ENST00000432057 GJA5P36382 358 aa21.39■■□□□ 1.02
VRK2-205ENST00000432057 ASTE1Q2TB18 679 aaPredicted RBP21.39■■□□□ 1.02
VRK2-205ENST00000432057 SLC9C1Q4G0N8 1177 aa21.39■■□□□ 1.02
VRK2-205ENST00000432057 FAM133AQ8N9E0 248 aa21.39■■□□□ 1.02
VRK2-205ENST00000432057 BSNDQ8WZ55 320 aa21.39■■□□□ 1.02
VRK2-205ENST00000432057 KIFC3Q9BVG8 833 aa21.39■■□□□ 1.02
VRK2-205ENST00000432057 IFIH1Q9BYX4 1025 aaKnown RBP21.39■■□□□ 1.02
VRK2-205ENST00000432057 SSU72P8A0A1W2PR75 194 aa21.39■■□□□ 1.01
VRK2-205ENST00000432057 TADA3O75528 432 aa21.39■■□□□ 1.01
VRK2-205ENST00000432057 UCHL3P15374 230 aa21.39■■□□□ 1.01
VRK2-205ENST00000432057 UBA1P22314 1058 aaKnown RBP21.39■■□□□ 1.01
VRK2-205ENST00000432057 EDNRBP24530 442 aa21.39■■□□□ 1.01
VRK2-205ENST00000432057 ERCC6LQ2NKX8 1250 aa21.39■■□□□ 1.01
VRK2-205ENST00000432057 CBWD1Q9BRT8 395 aa21.39■■□□□ 1.01
VRK2-205ENST00000432057 AJAP1Q9UKB5 411 aaPredicted RBP21.39■■□□□ 1.01
VRK2-205ENST00000432057 PCDHA13Q9Y5I0 950 aa21.39■■□□□ 1.01
VRK2-205ENST00000432057 SYNGAP1Q96PV0 1343 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 PLXNB2O15031 1838 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 GTPBP10A4D1E9 387 aaKnown RBP21.38■■□□□ 1.01
VRK2-205ENST00000432057 CCDC169A6NNP5 214 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 NPTX2P47972 431 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 FMO5P49326 533 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 ARID5AQ03989 594 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 MYBPC2Q14324 1141 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 ASIC2Q16515 512 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 GPAT2Q6NUI2 795 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 RDH13Q8NBN7 331 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 RBPJLQ9UBG7 517 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 DUSP10Q9Y6W6 482 aa21.38■■□□□ 1.01
VRK2-205ENST00000432057 GFPT1Q06210 699 aaPredicted RBP21.37■■□□□ 1.01
VRK2-205ENST00000432057 BFSP1Q12934 665 aa21.37■■□□□ 1.01
VRK2-205ENST00000432057 DMP1Q13316 513 aaPredicted RBP21.37■■□□□ 1.01
VRK2-205ENST00000432057 PPP2R5AQ15172 486 aa21.37■■□□□ 1.01
VRK2-205ENST00000432057 TMEM161BQ8NDZ6 487 aa21.37■■□□□ 1.01
VRK2-205ENST00000432057 XPNPEP1Q9NQW7 623 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms