RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ZC3H12AQ5D1E8 599 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 SPDYCQ5MJ68 293 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 TTC8Q8TAM2 541 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 TBCKQ8TEA7 893 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 RAD54LQ92698 747 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 EZH1Q92800 747 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 ARHGEF2Q92974 986 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 TMEM260Q9NX78 707 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 BIN2Q9UBW5 565 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 MAD2L2Q9UI95 211 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 IGSF9BQ9UPX0 1349 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 GPR75-ASB3A0A0A6YYF3 556 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 NPHP3-ACAD11A0A0J9YXS1 232 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 ANKRD63C9JTQ0 380 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 DDX3XO00571 662 aaKnown RBP eCLIP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 DDX3YO15523 660 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 RIPK2O43353 540 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 FLOT1O75955 427 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 TPBGLP0DKB5 382 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 UCHL3P15374 230 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 ATP6V1C1P21283 382 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 SP100P23497 879 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 TARSP26639 723 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 PEX5P50542 639 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 GALCP54803 685 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 MRPS35P82673 323 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 PDCD2Q16342 344 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 ECM1Q16610 540 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 C10orf76Q5T2E6 689 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 VSTM1Q6UX27 236 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 FAM47EQ6ZV65 393 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 TAOK1Q7L7X3 1001 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 NEK8Q86SG6 692 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 KSR1Q8IVT5 923 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 PROM2Q8N271 834 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 DRAXINQ8NBI3 349 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 B4GALNT2Q8NHY0 566 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 SNX29Q8TEQ0 813 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 NUDCD1Q96RS6 583 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 TRIM7Q9C029 511 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 ANKIB1Q9P2G1 1089 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 PRKAG3Q9UGI9 489 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 ASB3Q9Y575 518 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 KAT6BQ8WYB5 2073 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 RNF8O76064 485 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 UNC5CO95185 931 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 NPTXRO95502 500 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 RANBP1P43487 201 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 SESN3P58005 492 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 TFAP4Q01664 338 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 CADPS2Q86UW7 1296 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 MARCH10Q8NA82 808 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 DAGLBQ8NCG7 672 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 ZCRB1Q8TBF4 217 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 PIGOQ8TEQ8 1089 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 STK32AQ8WU08 396 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 TGS1Q96RS0 853 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 TRIM4Q9C037 500 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 IL17RBQ9NRM6 502 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 BSDC1Q9NW68 430 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 WDR35Q9P2L0 1181 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 HAO1Q9UJM8 370 aa11.97□□□□□ -0.49
SEMA4D-209ENST00000429836 LTBP4Q8N2S1 1624 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 TRPM3Q9HCF6 1732 aaPredicted RBP11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 USP17L3A6NCW0 530 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 USP17L4A6NCW7 530 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 ACSL3O95573 720 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 CCNB1P14635 433 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 ALDH3A1P30838 453 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 MAPK7Q13164 816 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 FAM26FQ5R3K3 315 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 MTHFD1LQ6UB35 978 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 USP17L1Q7RTZ2 530 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 FAM13CQ8NE31 585 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 SH3RF3Q8TEJ3 882 aaPredicted RBP11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 ALG3Q92685 438 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 MOV10L1Q9BXT6 1211 aaKnown RBP11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 MYLK2Q9H1R3 596 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 CYP39A1Q9NYL5 469 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 ASAP1Q9ULH1 1129 aa11.96□□□□□ -0.49
SEMA4D-209ENST00000429836 UBR2Q8IWV8 1755 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 GOLGB1Q14789 3259 aaKnown RBP11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 PFASO15067 1338 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 C1orf167Q5SNV9 1468 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 SMCO2A6NFE2 343 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 ERVV-2B6SEH9 535 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 SLC37A4O43826 429 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 ENTPD5O75356 428 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 WFS1O76024 890 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 PTDSS1P48651 473 aaKnown RBP11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 KLC1Q07866 573 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 TNFAIP8L3Q5GJ75 292 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 DPY19L2P1Q6NXN4 242 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 SYCE1Q8N0S2 351 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 SLC35G2Q8TBE7 412 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 RAB3IPQ96QF0 476 aaPredicted RBP11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 VAT1LQ9HCJ6 419 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 KLHL14Q9P2G3 628 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 STK17AQ9UEE5 414 aa11.96□□□□□ -0.5
SEMA4D-209ENST00000429836 HDAC9Q9UKV0 1011 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms