RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 BCAS3Q9H6U6 928 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 VTA1Q9NP79 307 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 GOLGA6CA6NDK9 693 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 CLSTN1O94985 981 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 GOLGA6DP0CG33 693 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 TXNP10599 105 aaKnown RBP12.5□□□□□ -0.41
CECR3-201ENST00000428828 EZRP15311 586 aaKnown RBP12.5□□□□□ -0.41
CECR3-201ENST00000428828 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
CECR3-201ENST00000428828 PAX7P23759 505 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 ACTN3Q08043 901 aaPredicted RBP12.5□□□□□ -0.41
CECR3-201ENST00000428828 GJC2Q5T442 439 aaPredicted RBP12.5□□□□□ -0.41
CECR3-201ENST00000428828 MFSD14CQ5VZR4 134 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 NCAPH2Q6IBW4 605 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 ELOA2Q8IYF1 753 aaPredicted RBP12.5□□□□□ -0.41
CECR3-201ENST00000428828 SLC5A5Q92911 643 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 CDHR1Q96JP9 859 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 KATNBL1Q9H079 304 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 CSRNP2Q9H175 543 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 ACTR5Q9H9F9 607 aaPredicted RBP12.5□□□□□ -0.41
CECR3-201ENST00000428828 GOLGA6AQ9NYA3 693 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 PUF60Q9UHX1 559 aaKnown RBP12.5□□□□□ -0.41
CECR3-201ENST00000428828 PCDHA12Q9UN75 941 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 ADGRG1Q9Y653 693 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 PTCH2Q9Y6C5 1203 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.49□□□□□ -0.41
CECR3-201ENST00000428828 PP2D1A8MPX8 630 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 SPATA31C2B4DYI2 1134 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 TBX3O15119 743 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 ATP1A3P13637 1013 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 KCNA2P16389 499 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 FECHP22830 423 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 CDC25AP30304 524 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 SLC8A1P32418 973 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 PRPHP41219 470 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 CEP85LQ5SZL2 805 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 ARL6IP4Q66PJ3 421 aaKnown RBP12.49□□□□□ -0.41
CECR3-201ENST00000428828 TAPT1Q6NXT6 567 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 CYFIP1Q7L576 1253 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 KIAA1328Q86T90 577 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 COPS5Q92905 334 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 FERMT2Q96AC1 680 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 NAPGQ99747 312 aaPredicted RBP12.49□□□□□ -0.41
CECR3-201ENST00000428828 TEKT3Q9BXF9 490 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 SRPRBQ9Y5M8 271 aaKnown RBP12.49□□□□□ -0.41
CECR3-201ENST00000428828 GGPS1O95749 300 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 CNGA1P29973 690 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 NDUFA8P51970 172 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 IFFO1Q0D2I5 559 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 IRF5Q13568 498 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 TTLL4Q14679 1199 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 CCDC26Q8TAB7 109 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 SCFD2Q8WU76 684 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 LENG1Q96BZ8 264 aaPredicted RBP12.49□□□□□ -0.41
CECR3-201ENST00000428828 FAM20AQ96MK3 541 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 CRACR2AQ9BSW2 395 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 MRPL44Q9H9J2 332 aaKnown RBP12.49□□□□□ -0.41
CECR3-201ENST00000428828 TCEAL9Q9UHQ7 104 aa12.49□□□□□ -0.41
CECR3-201ENST00000428828 MAFGO15525 162 aa12.48□□□□□ -0.41
CECR3-201ENST00000428828 PSMD10O75832 226 aa12.48□□□□□ -0.41
CECR3-201ENST00000428828 IPO7O95373 1038 aaKnown RBP12.48□□□□□ -0.41
CECR3-201ENST00000428828 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
CECR3-201ENST00000428828 ICAM3P32942 547 aa12.48□□□□□ -0.41
CECR3-201ENST00000428828 CTCFP49711 727 aaPredicted RBP12.48□□□□□ -0.41
CECR3-201ENST00000428828 SLMAPQ14BN4 828 aa12.48□□□□□ -0.41
CECR3-201ENST00000428828 CCDC40Q4G0X9 1142 aa12.48□□□□□ -0.41
CECR3-201ENST00000428828 UNC45AQ9H3U1 944 aa12.48□□□□□ -0.41
CECR3-201ENST00000428828 CD248Q9HCU0 757 aa12.48□□□□□ -0.41
CECR3-201ENST00000428828 INTS13Q9NVM9 706 aa12.48□□□□□ -0.41
CECR3-201ENST00000428828 VAV3Q9UKW4 847 aa12.48□□□□□ -0.41
CECR3-201ENST00000428828 TELO2Q9Y4R8 837 aa12.48□□□□□ -0.41
CECR3-201ENST00000428828 SAMM50Q9Y512 469 aa12.48□□□□□ -0.41
CECR3-201ENST00000428828 LOXHD1Q8IVV2 1947 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 A0A087WWV3 80 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 FAM237AA0A1B0GTK4 181 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 AGPSO00116 658 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 MYO1FO00160 1098 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
CECR3-201ENST00000428828 DHX15O43143 795 aaKnown RBP12.47□□□□□ -0.41
CECR3-201ENST00000428828 ADCY6O43306 1168 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 HMGCRP04035 888 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 RHOXF2BP0C7M4 288 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 ZNF865P0CJ78 1059 aaPredicted RBP12.47□□□□□ -0.41
CECR3-201ENST00000428828 SMPD1P17405 629 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 CMA1P23946 247 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 FXR2P51116 673 aaKnown RBP eCLIP12.47□□□□□ -0.41
CECR3-201ENST00000428828 CDR1P51861 262 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 AMPD2Q01433 879 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 CACNB2Q08289 660 aaPredicted RBP12.47□□□□□ -0.41
CECR3-201ENST00000428828 SHC4Q6S5L8 630 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 USP49Q70CQ1 688 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 TRMT44Q8IYL2 757 aaKnown RBP12.47□□□□□ -0.41
CECR3-201ENST00000428828 C3orf20Q8ND61 904 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 TRPV1Q8NER1 839 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 SH3TC2Q8TF17 1288 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 SYMPKQ92797 1274 aaKnown RBP12.47□□□□□ -0.41
CECR3-201ENST00000428828 CCDC51Q96ER9 411 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 EPSTI1Q96J88 318 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 RIT2Q99578 217 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 RHOXF2Q9BQY4 288 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 RAB34Q9BZG1 259 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms