RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 UBE4BO95155 1302 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 ADGRA3Q8IWK6 1321 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 IGKV6-21A0A0C4DH24 114 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 BECN2A8MW95 431 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 K7ENM7 598 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 HAS3O00219 553 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 PSMA7O14818 248 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 AP5Z1O43299 807 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 PPP1R37O75864 691 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 GCNT3O95395 438 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 PGK1P00558 417 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 C6orf222P0C671 652 aaPredicted RBP11.98□□□□□ -0.49
CRIM1-204ENST00000428774 RARBP10826 455 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 INSRRP14616 1297 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 CCNE1P24864 410 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 PPP1R2P41236 205 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 NCKAP1LP55160 1127 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 PURAQ00577 322 aaKnown RBP11.98□□□□□ -0.49
CRIM1-204ENST00000428774 TBC1D8BQ0IIM8 1120 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 DRP2Q13474 957 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 STIM1Q13586 685 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 MFSD10Q14728 455 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 BMT2Q1RMZ1 405 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 UVSSAQ2YD98 709 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 ZNF484Q5JVG2 852 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 TTI2Q6NXR4 508 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 NELFCDQ8IXH7 590 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 FAM178BQ8IXR5 827 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 MYOCDQ8IZQ8 938 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 ASAP3Q8TDY4 903 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 PPP1R13LQ8WUF5 828 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 SLC7A3Q8WY07 619 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 P2RX5Q93086 422 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 TMEM143Q96AN5 459 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 DHTKD1Q96HY7 919 aaPredicted RBP11.98□□□□□ -0.49
CRIM1-204ENST00000428774 SEMA6BQ9H3T3 888 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 MRPL44Q9H9J2 332 aaKnown RBP11.98□□□□□ -0.49
CRIM1-204ENST00000428774 XPNPEP3Q9NQH7 507 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 DDX20Q9UHI6 824 aaKnown RBP11.98□□□□□ -0.49
CRIM1-204ENST00000428774 NFE2L3Q9Y4A8 694 aa11.98□□□□□ -0.49
CRIM1-204ENST00000428774 SMTNL1A8MU46 457 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 GOLGA6L19H0YKK7 550 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 EIF3DO15371 548 aaKnown RBP eCLIP11.97□□□□□ -0.49
CRIM1-204ENST00000428774 PRPF6O94906 941 aaKnown RBP11.97□□□□□ -0.49
CRIM1-204ENST00000428774 MAPTP10636 758 aaKnown RBP11.97□□□□□ -0.49
CRIM1-204ENST00000428774 HOXD13P35453 343 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 ARL2P36404 184 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 PSEN2P49810 448 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 PEX3P56589 373 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 RTP1P59025 263 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 IGBP1P78318 339 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 PPFIA1Q13136 1202 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
CRIM1-204ENST00000428774 GRIK4Q16099 956 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 ZCWPW2Q504Y3 356 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 ZC2HC1CQ53FD0 456 aaPredicted RBP11.97□□□□□ -0.49
CRIM1-204ENST00000428774 L1TD1Q5T7N2 865 aaKnown RBP11.97□□□□□ -0.49
CRIM1-204ENST00000428774 LHX8Q68G74 356 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 LRRC71Q8N4P6 559 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 LINC01465Q8N7H1 131 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 KIFAP3Q92845 792 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 DEFB118Q96PH6 123 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 DUSP9Q99956 384 aaKnown RBP11.97□□□□□ -0.49
CRIM1-204ENST00000428774 KIFC3Q9BVG8 833 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 STRA6Q9BX79 667 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 RNF208Q9H0X6 261 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 KCTD10Q9H3F6 313 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 HMX1Q9NP08 348 aaPredicted RBP11.97□□□□□ -0.49
CRIM1-204ENST00000428774 PAK6Q9NQU5 681 aaPredicted RBP11.97□□□□□ -0.49
CRIM1-204ENST00000428774 LARSQ9P2J5 1176 aaKnown RBP11.97□□□□□ -0.49
CRIM1-204ENST00000428774 KAT6AQ92794 2004 aa11.97□□□□□ -0.49
CRIM1-204ENST00000428774 BRCA2P51587 3418 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 SLC16A4O15374 487 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 SMIM10L2AP0DMW4 78 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 SMIM10L2BP0DMW5 78 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 GLRA2P23416 452 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 CST5P28325 142 aaPredicted RBP11.96□□□□□ -0.49
CRIM1-204ENST00000428774 NPTX2P47972 431 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 CLCN3P51790 818 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 KCNA1Q09470 495 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 DMP1Q13316 513 aaPredicted RBP11.96□□□□□ -0.49
CRIM1-204ENST00000428774 CAPSQ13938 189 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 KIAA0753Q2KHM9 967 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 BRDTQ58F21 947 aaPredicted RBP11.96□□□□□ -0.49
CRIM1-204ENST00000428774 SPATA1Q5VX52 437 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 ANKRD40Q6AI12 368 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 CENPPQ6IPU0 288 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 ZNF720Q7Z2F6 126 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 KSR1Q8IVT5 923 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 KLHDC9Q8NEP7 349 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 SPIRE2Q8WWL2 714 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 ABHD8Q96I13 439 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 IKZF4Q9H2S9 585 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 ST6GALNAC4Q9H4F1 302 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 SAMSN1Q9NSI8 373 aaKnown RBP11.96□□□□□ -0.49
CRIM1-204ENST00000428774 FANCLQ9NW38 375 aa11.96□□□□□ -0.49
CRIM1-204ENST00000428774 TRIP12Q14669 1992 aaPredicted RBP11.96□□□□□ -0.5
CRIM1-204ENST00000428774 BICDL2A1A5D9 508 aa11.95□□□□□ -0.5
CRIM1-204ENST00000428774 GAS2O43903 313 aaKnown RBP11.95□□□□□ -0.5
CRIM1-204ENST00000428774 ATP1A3P13637 1013 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms