RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 ZNF865P0CJ78 1059 aaPredicted RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 HOXD10P28358 340 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 DNM2P50570 870 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 POLGP54098 1239 aaPredicted RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 PMS1P54277 932 aaKnown RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 STX17P56962 302 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 MCCD1P59942 119 aaPredicted RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 SP3Q02447 781 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 TNFAIP2Q03169 654 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 MXD4Q14582 209 aaPredicted RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 NR1I3Q14994 352 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 EMC2Q15006 297 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 KRT31Q15323 416 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 DGKDQ16760 1214 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 CCDC144BQ3MJ40 725 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 MFSD14CQ5VZR4 134 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 PLA2G4FQ68DD2 849 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 SPECC1LQ69YQ0 1117 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 PAXIP1Q6ZW49 1069 aaPredicted RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 EEPD1Q7L9B9 569 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 IRF2BP1Q8IU81 584 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 MAP4K3Q8IVH8 894 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 VSTM4Q8IW00 320 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 CCDC150Q8NCX0 1101 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 GLG1Q92896 1179 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 CNOT6LQ96LI5 555 aaKnown RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 ACCSQ96QU6 501 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 SRRTQ9BXP5 876 aaKnown RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 GBP3Q9H0R5 595 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 ZHX3Q9H4I2 956 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 BCAS3Q9H6U6 928 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 RTN4Q9NQC3 1192 aaKnown RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 MAPK8IP1Q9UQF2 711 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 GNEQ9Y223 722 aaKnown RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 TRIM49BA6NDI0 452 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 RRN3P2A6NIE6 340 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 K7ENM7 598 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 ASAP2O43150 1006 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 NRDCO43847 1150 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 PIGRP01833 764 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 LGALS2P05162 132 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 PTMAP06454 111 aaKnown RBP9.98□□□□□ -0.81
NR1I3-209ENST00000428574 AKR1A1P14550 325 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 PBX1P40424 430 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 ADCYAP1R1P41586 468 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 PSMC4P43686 418 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 CPT1AP50416 773 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 CASP5P51878 434 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 EFNA5P52803 228 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 COPB1P53618 953 aaKnown RBP9.98□□□□□ -0.81
NR1I3-209ENST00000428574 NPEPPSP55786 919 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 SP4Q02446 784 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 RAD51AP2Q09MP3 1159 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 TBC1D8BQ0IIM8 1120 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 PLCB4Q15147 1175 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 MAN2A1Q16706 1144 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 IER5Q5VY09 327 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 HAUS6Q7Z4H7 955 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 FRMD5Q7Z6J6 570 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 RETREG2Q8NC44 543 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 TMEM161BQ8NDZ6 487 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 HPS3Q969F9 1004 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 TUBGCP2Q9BSJ2 902 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 NFKBIZQ9BYH8 718 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 XPNPEP1Q9NQW7 623 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 PDGFCQ9NRA1 345 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 DMAC2Q9NW81 257 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 ARHGAP28Q9P2N2 729 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 ZHX1Q9UKY1 873 aaPredicted RBP9.98□□□□□ -0.81
NR1I3-209ENST00000428574 DAAM1Q9Y4D1 1078 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 ZMYM2Q9UBW7 1377 aa9.98□□□□□ -0.81
NR1I3-209ENST00000428574 DUSP11O75319 330 aaKnown RBP9.97□□□□□ -0.81
NR1I3-209ENST00000428574 F2P00734 622 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 MMP3P08254 477 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 MYBP10242 640 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 SMPD1P17405 629 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 NR2F2P24468 414 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 HOXD13P35453 343 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 ARL2P36404 184 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 NPTX2P47972 431 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 KCNJ6P48051 423 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 CDC42EP1Q00587 391 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 LRRC41Q15345 812 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 MTERF2Q49AM1 385 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 FIGNQ5HY92 759 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 FAM102BQ5T8I3 360 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 SMYD5Q6GMV2 418 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 DRC7Q8IY82 874 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 GLIS3Q8NEA6 775 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 OR6J1Q8NGC5 347 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 PXYLP1Q8TE99 480 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 PSPC1Q8WXF1 523 aaKnown RBP9.97□□□□□ -0.81
NR1I3-209ENST00000428574 ERO1AQ96HE7 468 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 ERGIC2Q96RQ1 377 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 C16orf70Q9BSU1 422 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 KATNAL1Q9BW62 490 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 FGFBP2Q9BYJ0 223 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 POLR3FQ9H1D9 316 aaPredicted RBP9.97□□□□□ -0.81
NR1I3-209ENST00000428574 C2orf40Q9H1Z8 148 aa9.97□□□□□ -0.81
NR1I3-209ENST00000428574 TMEM134Q9H6X4 195 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms