RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 GOPCQ9HD26 462 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 CHORDC1Q9UHD1 332 aaPredicted RBP17.09■□□□□ 0.33
GHDC-203ENST00000428494 PNMA2Q9UL42 364 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 PCDHAC2Q9Y5I4 1007 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 MYO3BQ8WXR4 1341 aa17.08■□□□□ 0.33
GHDC-203ENST00000428494 A0A0A6YYK5 440 aaPredicted RBP17.08■□□□□ 0.33
GHDC-203ENST00000428494 SMCHD1A6NHR9 2005 aa17.08■□□□□ 0.33
GHDC-203ENST00000428494 RASSF9O75901 435 aa17.08■□□□□ 0.33
GHDC-203ENST00000428494 RPL13P26373 211 aaKnown RBP17.08■□□□□ 0.33
GHDC-203ENST00000428494 CTTNQ14247 550 aaKnown RBP17.08■□□□□ 0.33
GHDC-203ENST00000428494 AGBL2Q5U5Z8 902 aa17.08■□□□□ 0.33
GHDC-203ENST00000428494 ERMNQ8TAM6 284 aa17.08■□□□□ 0.33
GHDC-203ENST00000428494 FMO2Q99518 471 aa17.08■□□□□ 0.33
GHDC-203ENST00000428494 NAP1L4Q99733 375 aaKnown RBP17.08■□□□□ 0.33
GHDC-203ENST00000428494 METTL14Q9HCE5 456 aaKnown RBP17.08■□□□□ 0.33
GHDC-203ENST00000428494 TMOD4Q9NZQ9 345 aa17.08■□□□□ 0.33
GHDC-203ENST00000428494 DNAJC12Q9UKB3 198 aa17.08■□□□□ 0.33
GHDC-203ENST00000428494 SPDYE3A6NKU9 549 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 SMIM23A6NLE4 172 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 TBCAO75347 108 aaKnown RBP17.08■□□□□ 0.32
GHDC-203ENST00000428494 TRIM49P0CI25 452 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 TRIM49CP0CI26 452 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 FERP16591 822 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 SOX5P35711 763 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 SMTNP53814 917 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 ARHGAP44Q17R89 818 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 CRY2Q49AN0 593 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 CBWD6Q4V339 395 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 CBWD3Q5JTY5 395 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 CBWD5Q5RIA9 395 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 SLFN13Q68D06 897 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 FAM186BQ8IYM0 893 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 THAP2Q9H0W7 228 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 COG5Q9UP83 839 aa17.08■□□□□ 0.32
GHDC-203ENST00000428494 TLDC2A0PJX2 215 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 SRRM3A6NNA2 597 aaPredicted RBP17.07■□□□□ 0.32
GHDC-203ENST00000428494 TOM1O60784 492 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 PLTPP55058 493 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 DOK7Q18PE1 504 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 CPLX4Q7Z7G2 160 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 MYCT1Q8N699 235 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 UHMK1Q8TAS1 419 aaKnown RBP17.07■□□□□ 0.32
GHDC-203ENST00000428494 ALG3Q92685 438 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 PSMD1Q99460 953 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 EIF2AK1Q9BQI3 630 aaKnown RBP17.07■□□□□ 0.32
GHDC-203ENST00000428494 EPB41L4BQ9H329 900 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 FAM114A2Q9NRY5 505 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 GGA2Q9UJY4 613 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 SNX24Q9Y343 169 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 DR1Q01658 176 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 PPATQ06203 517 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 PLS1Q14651 629 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 RINT1Q6NUQ1 792 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 RDH13Q8NBN7 331 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 RBM17Q96I25 401 aaKnown RBP17.07■□□□□ 0.32
GHDC-203ENST00000428494 GPR88Q9GZN0 384 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 RABGAP1Q9Y3P9 1069 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 ZMYM2Q9UBW7 1377 aa17.07■□□□□ 0.32
GHDC-203ENST00000428494 CHMP2AO43633 222 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 LRRN2O75325 713 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 CYP2J2P51589 502 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 NPEPPSP55786 919 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 BMT2Q1RMZ1 405 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 CCDC91Q7Z6B0 441 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 SIAH1Q8IUQ4 282 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 CTNNBL1Q8WYA6 563 aaPredicted RBP17.06■□□□□ 0.32
GHDC-203ENST00000428494 RFFLQ8WZ73 363 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 TATDN2Q93075 761 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 ZKSCAN4Q969J2 545 aaPredicted RBP17.06■□□□□ 0.32
GHDC-203ENST00000428494 ZDHHC18Q9NUE0 388 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 HAUS2Q9NVX0 235 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 VAV3Q9UKW4 847 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 FOCADQ5VW36 1801 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 SLC16A3O15427 465 aaKnown RBP17.06■□□□□ 0.32
GHDC-203ENST00000428494 PPFIA2O75334 1257 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 SERPINB2P05120 415 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 FMO5P49326 533 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 PTENP60484 403 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 SETQ01105 290 aaPredicted RBP17.06■□□□□ 0.32
GHDC-203ENST00000428494 IKQ13123 557 aaPredicted RBP17.06■□□□□ 0.32
GHDC-203ENST00000428494 ANKRD20A8PQ5CZ79 823 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 DUPD1Q68J44 220 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 TPH2Q8IWU9 490 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 CACNA2D3Q8IZS8 1091 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 ERP44Q9BS26 406 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 TXLNGYQ9BZA5 131 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 INTUQ9ULD6 942 aa17.06■□□□□ 0.32
GHDC-203ENST00000428494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
GHDC-203ENST00000428494 PSMC2P35998 433 aaKnown RBP17.05■□□□□ 0.32
GHDC-203ENST00000428494 DDR1Q08345 913 aa17.05■□□□□ 0.32
GHDC-203ENST00000428494 Q4G0T1 1027 aa17.05■□□□□ 0.32
GHDC-203ENST00000428494 FBXO25Q8TCJ0 367 aa17.05■□□□□ 0.32
GHDC-203ENST00000428494 RNF25Q96BH1 459 aaPredicted RBP17.05■□□□□ 0.32
GHDC-203ENST00000428494 C18orf8Q96DM3 657 aa17.05■□□□□ 0.32
GHDC-203ENST00000428494 STK33Q9BYT3 514 aa17.05■□□□□ 0.32
GHDC-203ENST00000428494 DAAM1Q9Y4D1 1078 aa17.05■□□□□ 0.32
GHDC-203ENST00000428494 DRD4P21917 467 aa17.05■□□□□ 0.32
GHDC-203ENST00000428494 MARCKSL1P49006 195 aa17.05■□□□□ 0.32
GHDC-203ENST00000428494 APOBEC3HQ6NTF7 200 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms