RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 CCL23P55773 120 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 UBE2HP62256 183 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 TFDP1Q14186 410 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 MXD4Q14582 209 aaPredicted RBP16.8■□□□□ 0.28
VARS2-203ENST00000428017 NAALADL2Q58DX5 795 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 C1orf186Q6ZWK4 172 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 LINC01465Q8N7H1 131 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 NLRP7Q8WX94 980 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 PPP1R16BQ96T49 567 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 POLR3FQ9H1D9 316 aaPredicted RBP16.8■□□□□ 0.28
VARS2-203ENST00000428017 XPNPEP1Q9NQW7 623 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 HPSEQ9Y251 543 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 COL4A3BPQ9Y5P4 624 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 TRPV2Q9Y5S1 764 aa16.8■□□□□ 0.28
VARS2-203ENST00000428017 MYH9P35579 1960 aaKnown RBP16.8■□□□□ 0.28
VARS2-203ENST00000428017 HIP1RO75146 1068 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 TBCAO75347 108 aaKnown RBP16.79■□□□□ 0.28
VARS2-203ENST00000428017 SLFN14P0C7P3 912 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 GUCY2CP25092 1073 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 NLRP11P59045 1033 aaKnown RBP16.79■□□□□ 0.28
VARS2-203ENST00000428017 RAD51AP2Q09MP3 1159 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 MKRN4PQ13434 485 aaPredicted RBP16.79■□□□□ 0.28
VARS2-203ENST00000428017 DRP2Q13474 957 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 E2F4Q16254 413 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 KIZQ2M2Z5 673 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 LRRC15Q8TF66 581 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 PRPF31Q8WWY3 499 aaKnown RBP16.79■□□□□ 0.28
VARS2-203ENST00000428017 IFT74Q96LB3 600 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 NLRP4Q96MN2 994 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 CELF4Q9BZC1 486 aaKnown RBP16.79■□□□□ 0.28
VARS2-203ENST00000428017 TNMDQ9H2S6 317 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 GOLPH3LQ9H4A5 285 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 GPRC5CQ9NQ84 441 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 CDY2AQ9Y6F7 541 aa16.79■□□□□ 0.28
VARS2-203ENST00000428017 UMODL1Q5DID0 1318 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 GADD45BO75293 160 aaPredicted RBP16.78■□□□□ 0.28
VARS2-203ENST00000428017 IQCF3P0C7M6 154 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 SRGAP2CP0DJJ0 459 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 RFC2P35250 354 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 ARL2P36404 184 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 GPC3P51654 580 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 CRYBB1P53674 252 aaPredicted RBP16.78■□□□□ 0.28
VARS2-203ENST00000428017 FAM160A1Q05DH4 1040 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 LAMTOR4Q0VGL1 99 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 PPP2R5AQ15172 486 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 FAM26DQ5JW98 314 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 MFSD5Q6N075 450 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 CNNM3Q8NE01 707 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 SERTAD1Q9UHV2 236 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 ODF2LQ9ULJ1 636 aa16.78■□□□□ 0.28
VARS2-203ENST00000428017 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.77■□□□□ 0.28
VARS2-203ENST00000428017 NPHP3-ACAD11A0A0J9YXS1 232 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 FAM13AO94988 1023 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 ZNF202O95125 648 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 CHRNA1P02708 482 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 PHKA2P46019 1235 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 KANK3Q6NY19 840 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 DYMQ7RTS9 669 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 ZNF410Q86VK4 478 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 KSR1Q8IVT5 923 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 RNF149Q8NC42 400 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 BADQ92934 168 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 SCLYQ96I15 445 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 ZNF668Q96K58 619 aaPredicted RBP16.77■□□□□ 0.28
VARS2-203ENST00000428017 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 GCOM2Q9BZD3 368 aaPredicted RBP16.77■□□□□ 0.28
VARS2-203ENST00000428017 WNT8AQ9H1J5 351 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 KCNG1Q9UIX4 513 aa16.77■□□□□ 0.28
VARS2-203ENST00000428017 LRRIQ4A6NIV6 560 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 ACTN4O43707 911 aaKnown RBP16.76■□□□□ 0.27
VARS2-203ENST00000428017 KINO60870 393 aaKnown RBP16.76■□□□□ 0.27
VARS2-203ENST00000428017 GPR32O75388 356 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 GLRA2P23416 452 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 ITGB8P26012 769 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 AFMP43652 599 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
VARS2-203ENST00000428017 FPGSQ05932 587 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 MGAT3Q09327 533 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 DMP1Q13316 513 aaPredicted RBP16.76■□□□□ 0.27
VARS2-203ENST00000428017 PPIGQ13427 754 aaKnown RBP eCLIP16.76■□□□□ 0.274e-8■■■□□ 15
VARS2-203ENST00000428017 LONRF3Q496Y0 759 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 ARSHQ5FYA8 562 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 ODR4Q5SWX8 454 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 KRBA2Q6ZNG9 492 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 RPUSD2Q8IZ73 545 aaKnown RBP16.76■□□□□ 0.27
VARS2-203ENST00000428017 USP38Q8NB14 1042 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 ASAP3Q8TDY4 903 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 DDX12PQ92771 950 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 STAMQ92783 540 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 OSMRQ99650 979 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 INO80BQ9C086 356 aaPredicted RBP16.76■□□□□ 0.27
VARS2-203ENST00000428017 C17orf75Q9HAS0 396 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 POLD4Q9HCU8 107 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 KBTBD4Q9NVX7 518 aa16.76■□□□□ 0.27
VARS2-203ENST00000428017 LARSQ9P2J5 1176 aaKnown RBP16.76■□□□□ 0.27
VARS2-203ENST00000428017 HOOK1Q9UJC3 728 aaKnown RBP16.76■□□□□ 0.27
VARS2-203ENST00000428017 A0A087WZ62 844 aa16.75■□□□□ 0.27
VARS2-203ENST00000428017 MYMKA6NI61 221 aa16.75■□□□□ 0.27
VARS2-203ENST00000428017 CCDC169A6NNP5 214 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms