RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 UHRF1Q96T88 793 aaPredicted RBP17■□□□□ 0.31
PHF1-204ENST00000427826 GCOM2Q9BZD3 368 aaPredicted RBP17■□□□□ 0.31
PHF1-204ENST00000427826 INO80BQ9C086 356 aaPredicted RBP17■□□□□ 0.31
PHF1-204ENST00000427826 NSUN3Q9H649 340 aaKnown RBP17■□□□□ 0.31
PHF1-204ENST00000427826 ATP6V0A4Q9HBG4 840 aa17■□□□□ 0.31
PHF1-204ENST00000427826 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
PHF1-204ENST00000427826 TMEM161AQ9NX61 479 aa17■□□□□ 0.31
PHF1-204ENST00000427826 MRPL42Q9Y6G3 142 aaKnown RBP17■□□□□ 0.31
PHF1-204ENST00000427826 COL4A4P53420 1690 aaPredicted RBP17■□□□□ 0.31
PHF1-204ENST00000427826 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.99■□□□□ 0.31
PHF1-204ENST00000427826 HOXA2O43364 376 aa16.99■□□□□ 0.31
PHF1-204ENST00000427826 IBSPP21815 317 aaPredicted RBP16.99■□□□□ 0.31
PHF1-204ENST00000427826 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
PHF1-204ENST00000427826 CALCRLQ16602 461 aa16.99■□□□□ 0.31
PHF1-204ENST00000427826 C8orf34Q49A92 452 aa16.99■□□□□ 0.31
PHF1-204ENST00000427826 PAN2Q504Q3 1202 aaKnown RBP16.99■□□□□ 0.31
PHF1-204ENST00000427826 NCAPH2Q6IBW4 605 aa16.99■□□□□ 0.31
PHF1-204ENST00000427826 ZNF410Q86VK4 478 aa16.99■□□□□ 0.31
PHF1-204ENST00000427826 C4orf19Q8IY42 314 aa16.99■□□□□ 0.31
PHF1-204ENST00000427826 SLC7A3Q8WY07 619 aa16.99■□□□□ 0.31
PHF1-204ENST00000427826 ZSWIM4Q9H7M6 989 aa16.99■□□□□ 0.31
PHF1-204ENST00000427826 UBE2ZQ9H832 354 aaPredicted RBP16.99■□□□□ 0.31
PHF1-204ENST00000427826 CYP26B1Q9NR63 512 aa16.99■□□□□ 0.31
PHF1-204ENST00000427826 AAASQ9NRG9 546 aa16.99■□□□□ 0.31
PHF1-204ENST00000427826 SUCLA2Q9P2R7 463 aaPredicted RBP16.99■□□□□ 0.31
PHF1-204ENST00000427826 PCDHA12Q9UN75 941 aa16.99■□□□□ 0.31
PHF1-204ENST00000427826 EVPLQ92817 2033 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 TMEM150BA6NC51 233 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 FAM205CA6NFA0 338 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 NEMFO60524 1076 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 KCNQ1P51787 676 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 HMGN5P82970 282 aaKnown RBP16.98■□□□□ 0.31
PHF1-204ENST00000427826 CCDC83Q8IWF9 413 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 C8orf76Q96K31 380 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 CEP170P1Q96L14 293 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 LXNQ9BS40 222 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 CHST12Q9NRB3 414 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 DACT1Q9NYF0 836 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 PLAGL2Q9UPG8 496 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 PCDHB12Q9Y5F1 795 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 REV3LO60673 3130 aa16.98■□□□□ 0.31
PHF1-204ENST00000427826 TBKBP1A7MCY6 615 aa16.97■□□□□ 0.31
PHF1-204ENST00000427826 GRM6O15303 877 aa16.97■□□□□ 0.31
PHF1-204ENST00000427826 GAS2O43903 313 aaKnown RBP16.97■□□□□ 0.31
PHF1-204ENST00000427826 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
PHF1-204ENST00000427826 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
PHF1-204ENST00000427826 RFC5P40937 340 aa16.97■□□□□ 0.31
PHF1-204ENST00000427826 POLGP54098 1239 aaPredicted RBP16.97■□□□□ 0.31
PHF1-204ENST00000427826 DRP2Q13474 957 aa16.97■□□□□ 0.31
PHF1-204ENST00000427826 TCEAL5Q5H9L2 206 aa16.97■□□□□ 0.31
PHF1-204ENST00000427826 SPOUT1Q5T280 376 aaKnown RBP16.97■□□□□ 0.31
PHF1-204ENST00000427826 FAM102BQ5T8I3 360 aa16.97■□□□□ 0.31
PHF1-204ENST00000427826 PLA2G4FQ68DD2 849 aa16.97■□□□□ 0.31
PHF1-204ENST00000427826 RHPN2Q8IUC4 686 aa16.97■□□□□ 0.31
PHF1-204ENST00000427826 PPP2R3CQ969Q6 453 aa16.97■□□□□ 0.31
PHF1-204ENST00000427826 ZNF668Q96K58 619 aaPredicted RBP16.97■□□□□ 0.31
PHF1-204ENST00000427826 SH2D3AQ9BRG2 576 aa16.97■□□□□ 0.31
PHF1-204ENST00000427826 RALGAPA2Q2PPJ7 1873 aa16.97■□□□□ 0.31
PHF1-204ENST00000427826 EOMESO95936 686 aa16.96■□□□□ 0.31
PHF1-204ENST00000427826 RBM25P49756 843 aaKnown RBP16.96■□□□□ 0.31
PHF1-204ENST00000427826 FOSBP53539 338 aa16.96■□□□□ 0.31
PHF1-204ENST00000427826 SPIRE1Q08AE8 756 aa16.96■□□□□ 0.31
PHF1-204ENST00000427826 ST3GAL1Q11201 340 aa16.96■□□□□ 0.31
PHF1-204ENST00000427826 CSPP1Q1MSJ5 1256 aa16.96■□□□□ 0.31
PHF1-204ENST00000427826 PUS10Q3MIT2 529 aaKnown RBP16.96■□□□□ 0.31
PHF1-204ENST00000427826 LEXMQ3ZCV2 418 aa16.96■□□□□ 0.31
PHF1-204ENST00000427826 FAM184AQ8NB25 1140 aa16.96■□□□□ 0.31
PHF1-204ENST00000427826 NEK9Q8TD19 979 aa16.96■□□□□ 0.31
PHF1-204ENST00000427826 DYDC2Q96IM9 177 aa16.96■□□□□ 0.31
PHF1-204ENST00000427826 KIF2CQ99661 725 aa16.96■□□□□ 0.31
PHF1-204ENST00000427826 DHX33Q9H6R0 707 aaKnown RBP16.96■□□□□ 0.31
PHF1-204ENST00000427826 TTC12Q9H892 705 aaPredicted RBP16.96■□□□□ 0.31
PHF1-204ENST00000427826 RGL1Q9NZL6 768 aa16.96■□□□□ 0.31
PHF1-204ENST00000427826 A0A087WZ62 844 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 A0A0U1RQF3 1178 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 ASAP2O43150 1006 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 SLITRK3O94933 977 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 SKIP12755 728 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 KCNA5P22460 613 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 GATMP50440 423 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 NPEPPSP55786 919 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 ORC2Q13416 577 aaPredicted RBP16.95■□□□□ 0.3
PHF1-204ENST00000427826 ECHDC2Q86YB7 292 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 TPH2Q8IWU9 490 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 ABI1Q8IZP0 508 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 KLHL23Q8NBE8 558 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 SPPL3Q8TCT6 385 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 TCP11Q8WWU5 503 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 PSPC1Q8WXF1 523 aaKnown RBP16.95■□□□□ 0.3
PHF1-204ENST00000427826 RSPH1Q8WYR4 309 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 PABPC5Q96DU9 382 aaKnown RBP16.95■□□□□ 0.3
PHF1-204ENST00000427826 EIF2AK1Q9BQI3 630 aaKnown RBP16.95■□□□□ 0.3
PHF1-204ENST00000427826 FDXACB1Q9BRP7 624 aaPredicted RBP16.95■□□□□ 0.3
PHF1-204ENST00000427826 TMEM117Q9H0C3 514 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 FOXP1Q9H334 677 aaPredicted RBP16.95■□□□□ 0.3
PHF1-204ENST00000427826 UPF2Q9HAU5 1272 aaKnown RBP16.95■□□□□ 0.3
PHF1-204ENST00000427826 ALG13Q9NP73 1137 aaKnown RBP16.95■□□□□ 0.3
PHF1-204ENST00000427826 WRAP73Q9P2S5 460 aaPredicted RBP16.95■□□□□ 0.3
PHF1-204ENST00000427826 LOXHD1Q8IVV2 1947 aa16.95■□□□□ 0.3
PHF1-204ENST00000427826 WDR81Q562E7 1941 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms