RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CSB-PGBD3P0DP91 1061 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 ALOX15P16050 662 aaPredicted RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 SERPINB3P29508 390 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 KIF11P52732 1056 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 USP46P62068 366 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 IL9RQ01113 521 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 SLC7A5Q01650 507 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 SSRP1Q08945 709 aaKnown RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 RPS6KA1Q15418 735 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 SLC9C1Q4G0N8 1177 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 MSS51Q4VC12 460 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 MFSD4BQ5TF39 518 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 RRAGBQ5VZM2 374 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 ARMC3Q5W041 872 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 KRT40Q6A162 431 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 SULT6B1Q6IMI4 303 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZNF280DQ6N043 979 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 LMOD2Q6P5Q4 547 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 FOXR2Q6PJQ5 311 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 C3orf62Q6ZUJ4 267 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 ACAD11Q709F0 780 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 NLRP9Q7RTR0 991 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 TMC3Q7Z5M5 1100 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 NUP93Q8N1F7 819 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 RIBC1Q8N443 379 aaPredicted RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 ENAHQ8N8S7 591 aaPredicted RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 KBTBD3Q8NAB2 608 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 LINS1Q8NG48 757 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 TBC1D16Q8TBP0 767 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 DIS3LQ8TF46 1054 aaKnown RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 DDI1Q8WTU0 396 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 NAT14Q8WUY8 206 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 SCFD1Q8WVM8 642 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 NELFBQ8WX92 580 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 CASKIN2Q8WXE0 1202 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 HLA-CQ95604 372 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 MCUR1Q96AQ8 359 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 LRRC37BQ96QE4 947 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 UIMC1Q96RL1 719 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 ERGIC2Q96RQ1 377 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 KRT12Q99456 494 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 HAUS7Q99871 368 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 SIKE1Q9BRV8 207 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 OXCT2Q9BYC2 517 aaPredicted RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZMYND12Q9H0C1 365 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 DDX47Q9H0S4 455 aaKnown RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 VPS16Q9H269 839 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 DDX21Q9NR30 783 aaKnown RBP eCLIP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 FAM217BQ9NTX9 383 aaPredicted RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 PKD2L1Q9P0L9 805 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 STX18Q9P2W9 335 aaKnown RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 STK17AQ9UEE5 414 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 SERTAD1Q9UHV2 236 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 HDAC9Q9UKV0 1011 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 TTC7AQ9ULT0 858 aaPredicted RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 ANGEL1Q9UNK9 670 aaKnown RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 FAF1Q9UNN5 650 aaPredicted RBP6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 CARD8Q9Y2G2 431 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 STXBP5LQ9Y2K9 1186 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 ACTL7BQ9Y614 415 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 NFS1Q9Y697 457 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 RGPD1P0DJD0 1748 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 NID2Q14112 1375 aa6.04□□□□□ -1.44
VTI1BP4-201ENST00000427516 FAM83GA6ND36 823 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 GNAT3A8MTJ3 354 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 RBAK-RBAKDNI3L0D1 243 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 TNFRSF10AO00220 468 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 PODXLO00592 558 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZNF185O15231 689 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 CYP27B1O15528 508 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 RANBP6O60518 1105 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 PEX11AO75192 247 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 PDE5AO76074 875 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 ASMTLO95671 621 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 GLI1P08151 1106 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 MSL3P1P0C860 447 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 FDPSP14324 419 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 KRT4P19013 534 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 BMP6P22004 513 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 PTPN4P29074 926 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 KRT2P35908 639 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 TRAPPC10P48553 1259 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 RPIAP49247 311 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 TMED10P49755 219 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 CCT8P50990 548 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 POLGP54098 1239 aaPredicted RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 PMS2P54278 862 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 YARSP54577 528 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 DRG2P55039 364 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 HDAC4P56524 1084 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 AP2B1P63010 937 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 KCNJ2P63252 427 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 CDR2Q01850 454 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 DHX9Q08211 1270 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 TEFQ10587 303 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 ASPHQ12797 758 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 DPYDQ12882 1025 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 RASGRF1Q13972 1273 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 SEPT7Q16181 437 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 CNGA3Q16281 694 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 365.1 ms