RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 NEMFO60524 1076 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 MAFO75444 373 aaPredicted RBP20.64■□□□□ 0.89
GPC1-205ENST00000427506 DARSP14868 501 aaKnown RBP20.64■□□□□ 0.89
GPC1-205ENST00000427506 ATP2B1P20020 1258 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 RBM25P49756 843 aaKnown RBP20.64■□□□□ 0.89
GPC1-205ENST00000427506 NPEPPSP55786 919 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 HMGN5P82970 282 aaKnown RBP20.64■□□□□ 0.89
GPC1-205ENST00000427506 TIGD5Q53EQ6 642 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 OTUD6AQ7L8S5 288 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 RHPN2Q8IUC4 686 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 SLC7A3Q8WY07 619 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 CEP89Q96ST8 783 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 UPF2Q9HAU5 1272 aaKnown RBP20.64■□□□□ 0.89
GPC1-205ENST00000427506 ATP6V0A4Q9HBG4 840 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 RGL1Q9NZL6 768 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 A0A0C4DFX4 3053 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 TRANK1O15050 2925 aa20.64■□□□□ 0.89
GPC1-205ENST00000427506 IGKV6-21A0A0C4DH24 114 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 TBKBP1A7MCY6 615 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 LINC00271P0C7V0 271 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 FGFR4P22455 802 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 TXKP42681 527 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 POLGP54098 1239 aaPredicted RBP20.63■□□□□ 0.89
GPC1-205ENST00000427506 CYP4A11Q02928 519 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 GNL2Q13823 731 aaKnown RBP20.63■□□□□ 0.89
GPC1-205ENST00000427506 CTTNQ14247 550 aaKnown RBP20.63■□□□□ 0.89
GPC1-205ENST00000427506 DSC3Q14574 896 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 SPOUT1Q5T280 376 aaKnown RBP20.63■□□□□ 0.89
GPC1-205ENST00000427506 TPH2Q8IWU9 490 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 C4orf19Q8IY42 314 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 EXOC8Q8IYI6 725 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 ADAMTS19Q8TE59 1207 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 PLVAPQ9BX97 442 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 ZSWIM4Q9H7M6 989 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 TTC12Q9H892 705 aaPredicted RBP20.63■□□□□ 0.89
GPC1-205ENST00000427506 TMEM161AQ9NX61 479 aa20.63■□□□□ 0.89
GPC1-205ENST00000427506 WRAP73Q9P2S5 460 aaPredicted RBP20.63■□□□□ 0.89
GPC1-205ENST00000427506 A0A087WZ62 844 aa20.62■□□□□ 0.89
GPC1-205ENST00000427506 GRM6O15303 877 aa20.62■□□□□ 0.89
GPC1-205ENST00000427506 CSDE1O75534 798 aaKnown RBP20.62■□□□□ 0.89
GPC1-205ENST00000427506 CSPG5O95196 566 aa20.62■□□□□ 0.89
GPC1-205ENST00000427506 YWHABP31946 246 aaKnown RBP20.62■□□□□ 0.89
GPC1-205ENST00000427506 KCNQ1P51787 676 aa20.62■□□□□ 0.89
GPC1-205ENST00000427506 SPIRE1Q08AE8 756 aa20.62■□□□□ 0.89
GPC1-205ENST00000427506 RABEP1Q15276 862 aa20.62■□□□□ 0.89
GPC1-205ENST00000427506 FAM102BQ5T8I3 360 aa20.62■□□□□ 0.89
GPC1-205ENST00000427506 NLRP4Q96MN2 994 aa20.62■□□□□ 0.89
GPC1-205ENST00000427506 FDXACB1Q9BRP7 624 aaPredicted RBP20.62■□□□□ 0.89
GPC1-205ENST00000427506 INO80BQ9C086 356 aaPredicted RBP20.62■□□□□ 0.89
GPC1-205ENST00000427506 LMAN2LQ9H0V9 348 aa20.62■□□□□ 0.89
GPC1-205ENST00000427506 ELAC1Q9H777 363 aaKnown RBP20.62■□□□□ 0.89
GPC1-205ENST00000427506 RALGAPA2Q2PPJ7 1873 aa20.62■□□□□ 0.89
GPC1-205ENST00000427506 NLRC5Q86WI3 1866 aa20.62■□□□□ 0.89
GPC1-205ENST00000427506 WNT7AO00755 349 aa20.61■□□□□ 0.89
GPC1-205ENST00000427506 ST18O60284 1047 aa20.61■□□□□ 0.89
GPC1-205ENST00000427506 FGFR1P11362 822 aa20.61■□□□□ 0.89
GPC1-205ENST00000427506 MCM7P33993 719 aa20.61■□□□□ 0.89
GPC1-205ENST00000427506 FAM189BP81408 668 aa20.61■□□□□ 0.89
GPC1-205ENST00000427506 XKR9Q5GH70 373 aa20.61■□□□□ 0.89
GPC1-205ENST00000427506 ZNF410Q86VK4 478 aa20.61■□□□□ 0.89
GPC1-205ENST00000427506 ZNF579Q8NAF0 562 aaKnown RBP20.61■□□□□ 0.89
GPC1-205ENST00000427506 UHRF1Q96T88 793 aaPredicted RBP20.61■□□□□ 0.89
GPC1-205ENST00000427506 EIF2AK1Q9BQI3 630 aaKnown RBP20.61■□□□□ 0.89
GPC1-205ENST00000427506 NSUN3Q9H649 340 aaKnown RBP20.61■□□□□ 0.89
GPC1-205ENST00000427506 ALG13Q9NP73 1137 aaKnown RBP20.61■□□□□ 0.89
GPC1-205ENST00000427506 BMP2KQ9NSY1 1161 aaPredicted RBP20.61■□□□□ 0.89
GPC1-205ENST00000427506 PPME1Q9Y570 386 aa20.61■□□□□ 0.89
GPC1-205ENST00000427506 BMP1P13497 986 aa20.6■□□□□ 0.89
GPC1-205ENST00000427506 SFPQP23246 707 aaKnown RBP eCLIP20.6■□□□□ 0.89
GPC1-205ENST00000427506 RFC5P40937 340 aa20.6■□□□□ 0.89
GPC1-205ENST00000427506 TCEAL5Q5H9L2 206 aa20.6■□□□□ 0.89
GPC1-205ENST00000427506 EP400NLQ6ZTU2 488 aa20.6■□□□□ 0.89
GPC1-205ENST00000427506 KSR1Q8IVT5 923 aa20.6■□□□□ 0.89
GPC1-205ENST00000427506 RNF169Q8NCN4 708 aa20.6■□□□□ 0.89
GPC1-205ENST00000427506 FBXO18Q8NFZ0 1043 aa20.6■□□□□ 0.89
GPC1-205ENST00000427506 P2RX5Q93086 422 aa20.6■□□□□ 0.89
GPC1-205ENST00000427506 UBE2ZQ9H832 354 aaPredicted RBP20.6■□□□□ 0.89
GPC1-205ENST00000427506 AAASQ9NRG9 546 aa20.6■□□□□ 0.89
GPC1-205ENST00000427506 PLAGL2Q9UPG8 496 aa20.6■□□□□ 0.89
GPC1-205ENST00000427506 HOXA2O43364 376 aa20.59■□□□□ 0.89
GPC1-205ENST00000427506 SLITRK3O94933 977 aa20.59■□□□□ 0.89
GPC1-205ENST00000427506 NAALADL2Q58DX5 795 aa20.59■□□□□ 0.89
GPC1-205ENST00000427506 ABI1Q8IZP0 508 aa20.59■□□□□ 0.89
GPC1-205ENST00000427506 KLHL23Q8NBE8 558 aa20.59■□□□□ 0.89
GPC1-205ENST00000427506 NEK9Q8TD19 979 aa20.59■□□□□ 0.89
GPC1-205ENST00000427506 TMEM143Q96AN5 459 aa20.59■□□□□ 0.89
GPC1-205ENST00000427506 CCDC43Q96MW1 224 aaKnown RBP20.59■□□□□ 0.89
GPC1-205ENST00000427506 MTMR9Q96QG7 549 aa20.59■□□□□ 0.89
GPC1-205ENST00000427506 FOXP1Q9H334 677 aaPredicted RBP20.59■□□□□ 0.89
GPC1-205ENST00000427506 DHX33Q9H6R0 707 aaKnown RBP20.59■□□□□ 0.89
GPC1-205ENST00000427506 DACT1Q9NYF0 836 aa20.59■□□□□ 0.89
GPC1-205ENST00000427506 PCDHB12Q9Y5F1 795 aa20.59■□□□□ 0.89
GPC1-205ENST00000427506 COL4A3BPQ9Y5P4 624 aa20.59■□□□□ 0.89
GPC1-205ENST00000427506 TNFRSF10AO00220 468 aa20.58■□□□□ 0.89
GPC1-205ENST00000427506 ZBTB39O15060 712 aa20.58■□□□□ 0.89
GPC1-205ENST00000427506 KCNA5P22460 613 aa20.58■□□□□ 0.89
GPC1-205ENST00000427506 ECHDC2Q86YB7 292 aa20.58■□□□□ 0.89
GPC1-205ENST00000427506 TCP11Q8WWU5 503 aa20.58■□□□□ 0.89
GPC1-205ENST00000427506 PRPF31Q8WWY3 499 aaKnown RBP20.58■□□□□ 0.89
GPC1-205ENST00000427506 PSPC1Q8WXF1 523 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms