RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 SLC9A9Q8IVB4 645 aa15.3■□□□□ 0.04
APOBEC3D-202ENST00000427494 MSANTD4Q8NCY6 345 aa15.3■□□□□ 0.04
APOBEC3D-202ENST00000427494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.3■□□□□ 0.04
APOBEC3D-202ENST00000427494 RHOXF2Q9BQY4 288 aa15.3■□□□□ 0.04
APOBEC3D-202ENST00000427494 TIPINQ9BVW5 301 aa15.3■□□□□ 0.04
APOBEC3D-202ENST00000427494 TMEM206Q9H813 350 aa15.3■□□□□ 0.04
APOBEC3D-202ENST00000427494 FBXL5Q9UKA1 691 aa15.3■□□□□ 0.04
APOBEC3D-202ENST00000427494 AJAP1Q9UKB5 411 aaPredicted RBP15.3■□□□□ 0.04
APOBEC3D-202ENST00000427494 WDR81Q562E7 1941 aa15.3■□□□□ 0.04
APOBEC3D-202ENST00000427494 DOCK5Q9H7D0 1870 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 A0A087X0T9 212 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 SPDYE16A6NNV3 312 aaPredicted RBP15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 ATP2A1O14983 1001 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 FAM228BP0C875 321 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 NAP1L1P55209 391 aaKnown RBP15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 GLIPR1L2Q4G1C9 344 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 ZNF746Q6NUN9 644 aaPredicted RBP15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 GJB7Q6PEY0 223 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 IRF2BP2Q7Z5L9 587 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 KRT222Q8N1A0 295 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 NOA1Q8NC60 698 aaKnown RBP15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 RDM1Q8NG50 284 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 RBM46Q8TBY0 533 aaKnown RBP15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 CAGE1Q8TC20 777 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 INPP4AQ96PE3 977 aaPredicted RBP15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 NOX5Q96PH1 765 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 PNKPQ96T60 521 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 MMS19Q96T76 1030 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 MOV10L1Q9BXT6 1211 aaKnown RBP15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 ANKEF1Q9NU02 776 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 FAM53CQ9NYF3 392 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 CYP39A1Q9NYL5 469 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 ADAMTS1Q9UHI8 967 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 SALL4Q9UJQ4 1053 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 LOC285556D6RIA3 1793 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 MYH10P35580 1976 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 ZNF185O15231 689 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 BUB1O43683 1085 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 TRIM49P0CI25 452 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 TRIM49CP0CI26 452 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 PNMA6AP0CW24 399 aaPredicted RBP15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 NPEPPSP55786 919 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 JAM2P57087 298 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 PTK2Q05397 1052 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 BRD3Q15059 726 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 PPP2R5AQ15172 486 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 FAM102BQ5T8I3 360 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 IQCEQ6IPM2 695 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 RNF10Q8N5U6 811 aaKnown RBP15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 ARFGAP3Q9NP61 516 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 GPRC5CQ9NQ84 441 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 A1CFQ9NQ94 594 aaKnown RBP15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 SNX12Q9UMY4 172 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 PCDHA10Q9Y5I2 948 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 BZW2Q9Y6E2 419 aaKnown RBP15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 SBF1O95248 1867 aa15.29■□□□□ 0.04
APOBEC3D-202ENST00000427494 LCTP09848 1927 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 MAFGO15525 162 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 USP2O75604 605 aaPredicted RBP15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 KCNA2P16389 499 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 BFSP1Q12934 665 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 MYBPC2Q14324 1141 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 CBWD6Q4V339 395 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 CBWD3Q5JTY5 395 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 CBWD5Q5RIA9 395 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 ZNF571Q7Z3V5 609 aaPredicted RBP15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 RDH13Q8NBN7 331 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 SENP7Q9BQF6 1050 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 PCIF1Q9H4Z3 704 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 HOXC10Q9NYD6 342 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 ARID2Q68CP9 1835 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 MYPNQ86TC9 1320 aa15.28■□□□□ 0.04
APOBEC3D-202ENST00000427494 CCDC151A5D8V7 595 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 TISP43B9A030 160 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 SLC16A4O15374 487 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 RGS20O76081 388 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 KRT13P13646 458 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 PEX3P56589 373 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 MYL7Q01449 175 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 SH3D19Q5HYK7 790 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 HAUS6Q7Z4H7 955 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 GABBR1Q9UBS5 961 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 RAB21Q9UL25 225 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 SNCAIPQ9Y6H5 919 aa15.27■□□□□ 0.04
APOBEC3D-202ENST00000427494 PTPRFP10586 1907 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 PRKCIP41743 596 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 NCKAP1LP55160 1127 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 GTF2BQ00403 316 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 VGLL4Q14135 290 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 NAB2Q15742 525 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 DLK2Q6UY11 383 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 ANO5Q75V66 913 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 RPGRIP1Q96KN7 1286 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 PACSIN1Q9BY11 444 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 INTS2Q9H0H0 1204 aaKnown RBP15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 ST6GALNAC4Q9H4F1 302 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 HYOU1Q9Y4L1 999 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 OTOFQ9HC10 1997 aa15.27■□□□□ 0.03
APOBEC3D-202ENST00000427494 DDNO94850 711 aaPredicted RBP15.26■□□□□ 0.03
APOBEC3D-202ENST00000427494 PSAPP07602 524 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms