RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TMEM206Q9H813 350 aa23.83■■□□□ 1.4
CNEP1R1-202ENST00000427478 KCNH4Q9UQ05 1017 aa23.83■■□□□ 1.4
CNEP1R1-202ENST00000427478 CTAGE9A4FU28 777 aa23.82■■□□□ 1.4
CNEP1R1-202ENST00000427478 SLC16A4O15374 487 aa23.82■■□□□ 1.4
CNEP1R1-202ENST00000427478 AKR1B10O60218 316 aa23.82■■□□□ 1.4
CNEP1R1-202ENST00000427478 PON1P27169 355 aa23.82■■□□□ 1.4
CNEP1R1-202ENST00000427478 RAPGEF1Q13905 1077 aa23.82■■□□□ 1.4
CNEP1R1-202ENST00000427478 ZNF662Q6ZS27 426 aa23.82■■□□□ 1.4
CNEP1R1-202ENST00000427478 SEPT14Q6ZU15 432 aa23.82■■□□□ 1.4
CNEP1R1-202ENST00000427478 HAUS6Q7Z4H7 955 aa23.82■■□□□ 1.4
CNEP1R1-202ENST00000427478 ACCSQ96QU6 501 aa23.82■■□□□ 1.4
CNEP1R1-202ENST00000427478 TISP43B9A030 160 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 POTEB2H3BUK9 544 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 TLR2O60603 784 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 DKC1O60832 514 aaKnown RBP eCLIP23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 CNMDO75829 334 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 STBD1O95210 358 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 VAV2P52735 878 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 DPY19L2P1Q6NXN4 242 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 ABHD15Q6UXT9 468 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 SYN2Q92777 582 aaPredicted RBP23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 PLCB1Q9NQ66 1216 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 GCNT4Q9P109 453 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 SEPT9Q9UHD8 586 aaPredicted RBP23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 KRT86O43790 486 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 EXOC3O60645 756 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 PRKCEQ02156 737 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 SLC9C1Q4G0N8 1177 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 GBP6Q6ZN66 633 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 CYFIP1Q7L576 1253 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 NAPGQ99747 312 aaPredicted RBP23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 R3HDMLQ9H3Y0 253 aa23.81■■□□□ 1.4
CNEP1R1-202ENST00000427478 SOWAHBA6NEL2 793 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 GLTPD2A6NH11 291 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 ICAM3P32942 547 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 NCKAP1LP55160 1127 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 ERCC6LQ2NKX8 1250 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 MIS18BP1Q6P0N0 1132 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 ARMC9Q7Z3E5 817 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 SLC9A9Q8IVB4 645 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 IFIH1Q9BYX4 1025 aaKnown RBP23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 TAF1DQ9H5J8 278 aaPredicted RBP23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 LCA5LO95447 670 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 SUPT20HL2P0C7V6 817 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 GTF2BQ00403 316 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 MAPK8IP2Q13387 824 aaPredicted RBP23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 KLHDC7AQ5VTJ3 777 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 RDH13Q8NBN7 331 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 ST6GALNAC4Q9H4F1 302 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 PCIF1Q9H4Z3 704 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 PCDHA13Q9Y5I0 950 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 FHOD1Q9Y613 1164 aa23.8■■□□□ 1.4
CNEP1R1-202ENST00000427478 SSU72P8A0A1W2PR75 194 aa23.79■■□□□ 1.4
CNEP1R1-202ENST00000427478 SERPING1P05155 500 aa23.79■■□□□ 1.4
CNEP1R1-202ENST00000427478 UCHL3P15374 230 aa23.79■■□□□ 1.4
CNEP1R1-202ENST00000427478 SOX10P56693 466 aa23.79■■□□□ 1.4
CNEP1R1-202ENST00000427478 ARID5AQ03989 594 aa23.79■■□□□ 1.4
CNEP1R1-202ENST00000427478 MOGSQ13724 837 aa23.79■■□□□ 1.4
CNEP1R1-202ENST00000427478 FAM133AQ8N9E0 248 aa23.79■■□□□ 1.4
CNEP1R1-202ENST00000427478 KIFC3Q9BVG8 833 aa23.79■■□□□ 1.4
CNEP1R1-202ENST00000427478 TXNRD2Q9NNW7 524 aa23.79■■□□□ 1.4
CNEP1R1-202ENST00000427478 CCDC169A6NNP5 214 aa23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 TRIM49P0CI25 452 aa23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 TRIM49CP0CI26 452 aa23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 GFPT1Q06210 699 aaPredicted RBP23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 KIF5AQ12840 1032 aa23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 GPR162Q16538 588 aa23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 ASTE1Q2TB18 679 aaPredicted RBP23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 SIX2Q9NPC8 291 aa23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 DUSP10Q9Y6W6 482 aa23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 IGSF9BQ9UPX0 1349 aa23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 GTPBP10A4D1E9 387 aaKnown RBP23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 TADA3O75528 432 aa23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 DMP1Q13316 513 aaPredicted RBP23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 ASIC2Q16515 512 aa23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 ZNF526Q8TF50 670 aaPredicted RBP23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 CBWD1Q9BRT8 395 aa23.78■■□□□ 1.4
CNEP1R1-202ENST00000427478 NPTX2P47972 431 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 FMO5P49326 533 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 MYBPC2Q14324 1141 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 PPP2R5AQ15172 486 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 ENOX2Q16206 610 aaKnown RBP23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 EHBP1Q8NDI1 1231 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 BSNDQ8WZ55 320 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 SPAG5Q96R06 1193 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 TSGA10Q9BZW7 698 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 AIPL1Q9NZN9 384 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 MACROD2A1Z1Q3 448 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 UBA1P22314 1058 aaKnown RBP23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 EDNRBP24530 442 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 SMTNP53814 917 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 BFSP1Q12934 665 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 PDCL2Q8N4E4 241 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 KIFAP3Q92845 792 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 CYP26B1Q9NR63 512 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 RBPJLQ9UBG7 517 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 CDC23Q9UJX2 597 aa23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 AJAP1Q9UKB5 411 aaPredicted RBP23.77■■□□□ 1.4
CNEP1R1-202ENST00000427478 SYNGAP1Q96PV0 1343 aa23.76■■□□□ 1.39
CNEP1R1-202ENST00000427478 SLC25A27O95847 323 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms