RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 BBS4Q96RK4 519 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 TSEN34Q9BSV6 310 aaKnown RBP8.28□□□□□ -1.08
LINC00649-203ENST00000427447 HDAC6Q9UBN7 1215 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 SRP68Q9UHB9 627 aaKnown RBP8.28□□□□□ -1.08
LINC00649-203ENST00000427447 SAMM50Q9Y512 469 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 MINK1Q8N4C8 1332 aaPredicted RBP8.28□□□□□ -1.08
LINC00649-203ENST00000427447 TSPAN4O14817 238 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 NTRK1P04629 796 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 HEXDCQ8WVB3 486 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 INPP5DQ92835 1189 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 SNX21Q969T3 373 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 CDC23Q9UJX2 597 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 H3BM21 787 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 M0QZ92 97 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 UQCRBP14927 111 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 VHLP40337 213 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 NFIAQ12857 509 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 TCEAL5Q5H9L2 206 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 CAMK1DQ8IU85 385 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 SAMD14Q8IZD0 417 aaPredicted RBP8.28□□□□□ -1.08
LINC00649-203ENST00000427447 SPATA18Q8TC71 538 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 VPS39Q96JC1 886 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 BTBD6Q96KE9 485 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 TCEAL7Q9BRU2 100 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 SPRTNQ9H040 489 aaPredicted RBP8.28□□□□□ -1.08
LINC00649-203ENST00000427447 ZCWPW1Q9H0M4 648 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 ABT1Q9ULW3 272 aaKnown RBP8.28□□□□□ -1.08
LINC00649-203ENST00000427447 MAP3K1Q13233 1512 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 CNOT3O75175 753 aaKnown RBP8.28□□□□□ -1.08
LINC00649-203ENST00000427447 PFDN5Q99471 154 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 NRBP1Q9UHY1 535 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 H7C2Y5 167 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 PMPCBO75439 489 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 AP1G2O75843 785 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 TAF5Q15542 800 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 C4orf50Q6ZRC1 276 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 ELAC1Q9H777 363 aaKnown RBP8.28□□□□□ -1.08
LINC00649-203ENST00000427447 SGSM2O43147 1006 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 CYP2C19P33261 490 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 RHAGQ02094 409 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 ZSCAN25Q6NSZ9 544 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 OSCP1Q8WVF1 389 aa8.28□□□□□ -1.08
LINC00649-203ENST00000427447 CAMSAP2Q08AD1 1489 aa8.27□□□□□ -1.08
LINC00649-203ENST00000427447 INO80B-WBP1J3KQ70 363 aa8.27□□□□□ -1.08
LINC00649-203ENST00000427447 ATP6V1G1O75348 118 aa8.27□□□□□ -1.08
LINC00649-203ENST00000427447 IFNA14P01570 189 aa8.27□□□□□ -1.08
LINC00649-203ENST00000427447 PITRM1Q5JRX3 1037 aa8.27□□□□□ -1.08
LINC00649-203ENST00000427447 DUS1LQ6P1R4 473 aaKnown RBP8.27□□□□□ -1.08
LINC00649-203ENST00000427447 RBM12BQ8IXT5 1001 aaKnown RBP8.27□□□□□ -1.08
LINC00649-203ENST00000427447 ZNF555Q8NEP9 628 aa8.27□□□□□ -1.08
LINC00649-203ENST00000427447 A0A087WZG4 1122 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 GMFGO60234 142 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 ST5P78524 1137 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 EDRF1Q3B7T1 1238 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 ARSHQ5FYA8 562 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 ARMCX5Q6P1M9 558 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 JDP2Q8WYK2 163 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 CROTQ9UKG9 612 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 PPP2R3BQ9Y5P8 575 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 DYNC1LI2O43237 492 aaPredicted RBP8.27□□□□□ -1.09
LINC00649-203ENST00000427447 GJA1P17302 382 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 STOMP27105 288 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 KPNA2P52292 529 aaKnown RBP8.27□□□□□ -1.09
LINC00649-203ENST00000427447 TWF2Q6IBS0 349 aaKnown RBP8.27□□□□□ -1.09
LINC00649-203ENST00000427447 APPL2Q8NEU8 664 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 NAPBQ9H115 298 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 RIC8AQ9NPQ8 531 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 CACNA2D2Q9NY47 1150 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 FAM177BA6PVY3 158 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 H0YCG3 227 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 MTSS1O43312 755 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 CUL4AQ13619 759 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 GIT2Q14161 759 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 SSX2Q16385 188 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 KRT40Q6A162 431 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 TSR2Q969E8 191 aaKnown RBP8.27□□□□□ -1.09
LINC00649-203ENST00000427447 PCDH18Q9HCL0 1135 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 PDZRN3Q9UPQ7 1066 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 MYO1GB0I1T2 1018 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 SSX5O60225 188 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 CASP2P42575 452 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 RAB2AP61019 212 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 AP1S1P61966 158 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 SMIM15Q7Z3B0 74 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 BEST2Q8NFU1 509 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 STK33Q9BYT3 514 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 TRIM10Q9UDY6 481 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 NUP50Q9UKX7 468 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 PTPRCP08575 1304 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 PCF11O94913 1555 aaKnown RBP8.27□□□□□ -1.09
LINC00649-203ENST00000427447 GMNCA6NCL1 334 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 C2orf71A6NGG8 1288 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 APAF1O14727 1248 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 NCAM2O15394 837 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 GNAI2P04899 355 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 CCDC84Q86UT8 332 aaPredicted RBP8.27□□□□□ -1.09
LINC00649-203ENST00000427447 C3orf20Q8ND61 904 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 TRPV1Q8NER1 839 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 MYL10Q9BUA6 226 aa8.27□□□□□ -1.09
LINC00649-203ENST00000427447 ERAP1Q9NZ08 941 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms